Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx4Q7TNK1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx4Q7TNK1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx4Q7TNK1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx4Q7TNK1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx4Q7TNK1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx4Q7TNK1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.85■□□□□ 0.45
Rfx4Q7TNK1 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.85■□□□□ 0.45
Rfx4Q7TNK1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx4Q7TNK1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx4Q7TNK1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx4Q7TNK1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Rfx4Q7TNK1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx4Q7TNK1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx4Q7TNK1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx4Q7TNK1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx4Q7TNK1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.84■□□□□ 0.45
Rfx4Q7TNK1 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.84■□□□□ 0.45
Rfx4Q7TNK1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx4Q7TNK1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx4Q7TNK1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx4Q7TNK1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx4Q7TNK1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx4Q7TNK1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx4Q7TNK1 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.83■□□□□ 0.45
Rfx4Q7TNK1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx4Q7TNK1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx4Q7TNK1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx4Q7TNK1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.83■□□□□ 0.44
Rfx4Q7TNK1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.83■□□□□ 0.44
Rfx4Q7TNK1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.83■□□□□ 0.44
Rfx4Q7TNK1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx4Q7TNK1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx4Q7TNK1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx4Q7TNK1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.83■□□□□ 0.44
Rfx4Q7TNK1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx4Q7TNK1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx4Q7TNK1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx4Q7TNK1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx4Q7TNK1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.82■□□□□ 0.44
Rfx4Q7TNK1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx4Q7TNK1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.82■□□□□ 0.44
Rfx4Q7TNK1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx4Q7TNK1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx4Q7TNK1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx4Q7TNK1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx4Q7TNK1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx4Q7TNK1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx4Q7TNK1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx4Q7TNK1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx4Q7TNK1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx4Q7TNK1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx4Q7TNK1 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.81■□□□□ 0.44
Rfx4Q7TNK1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx4Q7TNK1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx4Q7TNK1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx4Q7TNK1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rfx4Q7TNK1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rfx4Q7TNK1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.81■□□□□ 0.44
Rfx4Q7TNK1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx4Q7TNK1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx4Q7TNK1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx4Q7TNK1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx4Q7TNK1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx4Q7TNK1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx4Q7TNK1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx4Q7TNK1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx4Q7TNK1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
Rfx4Q7TNK1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx4Q7TNK1 Gm5812-201ENSMUST00000061073 957 ntBASIC17.8■□□□□ 0.44
Rfx4Q7TNK1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rfx4Q7TNK1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx4Q7TNK1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rfx4Q7TNK1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx4Q7TNK1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx4Q7TNK1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx4Q7TNK1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx4Q7TNK1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms