Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.94■□□□□ 0.78
Rnf139Q7TMV1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.94■□□□□ 0.78
Rnf139Q7TMV1 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.94■□□□□ 0.78
Rnf139Q7TMV1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Rnf139Q7TMV1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.94■□□□□ 0.78
Rnf139Q7TMV1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf139Q7TMV1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf139Q7TMV1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.94■□□□□ 0.78
Rnf139Q7TMV1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rnf139Q7TMV1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf139Q7TMV1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf139Q7TMV1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf139Q7TMV1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf139Q7TMV1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.93■□□□□ 0.78
Rnf139Q7TMV1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf139Q7TMV1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.93■□□□□ 0.78
Rnf139Q7TMV1 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.93■□□□□ 0.78
Rnf139Q7TMV1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf139Q7TMV1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Rnf139Q7TMV1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Rnf139Q7TMV1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf139Q7TMV1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf139Q7TMV1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf139Q7TMV1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf139Q7TMV1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf139Q7TMV1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf139Q7TMV1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf139Q7TMV1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.92■□□□□ 0.78
Rnf139Q7TMV1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rnf139Q7TMV1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf139Q7TMV1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.92■□□□□ 0.78
Rnf139Q7TMV1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf139Q7TMV1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf139Q7TMV1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf139Q7TMV1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf139Q7TMV1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf139Q7TMV1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rnf139Q7TMV1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf139Q7TMV1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rnf139Q7TMV1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf139Q7TMV1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf139Q7TMV1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf139Q7TMV1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf139Q7TMV1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf139Q7TMV1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.91■□□□□ 0.78
Rnf139Q7TMV1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf139Q7TMV1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf139Q7TMV1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf139Q7TMV1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf139Q7TMV1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf139Q7TMV1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rnf139Q7TMV1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
Rnf139Q7TMV1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf139Q7TMV1 Gm6365-201ENSMUST00000054711 744 ntBASIC19.9■□□□□ 0.78
Rnf139Q7TMV1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf139Q7TMV1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.9■□□□□ 0.78
Rnf139Q7TMV1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Rnf139Q7TMV1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf139Q7TMV1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.89■□□□□ 0.77
Rnf139Q7TMV1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf139Q7TMV1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf139Q7TMV1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rnf139Q7TMV1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf139Q7TMV1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.89■□□□□ 0.77
Rnf139Q7TMV1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf139Q7TMV1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf139Q7TMV1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf139Q7TMV1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf139Q7TMV1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf139Q7TMV1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf139Q7TMV1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Rnf139Q7TMV1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.88■□□□□ 0.77
Rnf139Q7TMV1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf139Q7TMV1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf139Q7TMV1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf139Q7TMV1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf139Q7TMV1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf139Q7TMV1 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.88■□□□□ 0.77
Rnf139Q7TMV1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf139Q7TMV1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf139Q7TMV1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf139Q7TMV1 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.87■□□□□ 0.77
Rnf139Q7TMV1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf139Q7TMV1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf139Q7TMV1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf139Q7TMV1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf139Q7TMV1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf139Q7TMV1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Rnf139Q7TMV1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf139Q7TMV1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf139Q7TMV1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf139Q7TMV1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf139Q7TMV1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf139Q7TMV1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf139Q7TMV1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf139Q7TMV1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf139Q7TMV1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf139Q7TMV1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf139Q7TMV1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.86■□□□□ 0.77
Rnf139Q7TMV1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms