Protein–RNA interactions for Protein: Q6Q473

Clca4a, Calcium-activated chloride channel regulator 4A, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca4aQ6Q473 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clca4aQ6Q473 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.19■□□□□ 0.98
Clca4aQ6Q473 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 Gm44549-201ENSMUST00000208351 577 ntBASIC21.18■□□□□ 0.98
Clca4aQ6Q473 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.18■□□□□ 0.98
Clca4aQ6Q473 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clca4aQ6Q473 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clca4aQ6Q473 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clca4aQ6Q473 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clca4aQ6Q473 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clca4aQ6Q473 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clca4aQ6Q473 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clca4aQ6Q473 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clca4aQ6Q473 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clca4aQ6Q473 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clca4aQ6Q473 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clca4aQ6Q473 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clca4aQ6Q473 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clca4aQ6Q473 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clca4aQ6Q473 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clca4aQ6Q473 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Clca4aQ6Q473 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.16■□□□□ 0.98
Clca4aQ6Q473 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clca4aQ6Q473 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clca4aQ6Q473 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clca4aQ6Q473 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clca4aQ6Q473 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clca4aQ6Q473 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clca4aQ6Q473 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clca4aQ6Q473 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clca4aQ6Q473 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Clca4aQ6Q473 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Clca4aQ6Q473 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.15■□□□□ 0.98
Clca4aQ6Q473 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clca4aQ6Q473 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clca4aQ6Q473 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clca4aQ6Q473 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clca4aQ6Q473 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Clca4aQ6Q473 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clca4aQ6Q473 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clca4aQ6Q473 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clca4aQ6Q473 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clca4aQ6Q473 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clca4aQ6Q473 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clca4aQ6Q473 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clca4aQ6Q473 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Clca4aQ6Q473 Gm12896-201ENSMUST00000118430 226 ntBASIC21.14■□□□□ 0.97
Clca4aQ6Q473 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clca4aQ6Q473 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Clca4aQ6Q473 Gm20760-201ENSMUST00000179197 648 ntBASIC21.14■□□□□ 0.97
Clca4aQ6Q473 Gm27275-201ENSMUST00000184318 272 ntBASIC21.14■□□□□ 0.97
Clca4aQ6Q473 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clca4aQ6Q473 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clca4aQ6Q473 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clca4aQ6Q473 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Clca4aQ6Q473 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clca4aQ6Q473 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clca4aQ6Q473 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Clca4aQ6Q473 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.13■□□□□ 0.97
Clca4aQ6Q473 BC021767-201ENSMUST00000126387 1716 ntBASIC21.13■□□□□ 0.97
Clca4aQ6Q473 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Clca4aQ6Q473 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Clca4aQ6Q473 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clca4aQ6Q473 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clca4aQ6Q473 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clca4aQ6Q473 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clca4aQ6Q473 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clca4aQ6Q473 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clca4aQ6Q473 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clca4aQ6Q473 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clca4aQ6Q473 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Clca4aQ6Q473 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.12■□□□□ 0.97
Clca4aQ6Q473 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.12■□□□□ 0.97
Clca4aQ6Q473 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.12■□□□□ 0.97
Clca4aQ6Q473 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Clca4aQ6Q473 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Clca4aQ6Q473 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clca4aQ6Q473 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Clca4aQ6Q473 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clca4aQ6Q473 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clca4aQ6Q473 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clca4aQ6Q473 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Clca4aQ6Q473 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clca4aQ6Q473 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.11■□□□□ 0.97
Clca4aQ6Q473 Dio3-201ENSMUST00000097228 1449 ntBASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms