Protein–RNA interactions for Protein: Q6PFR5

Tra2a, Transformer-2 protein homolog alpha, mousemouse

Known RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tra2aQ6PFR5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tra2aQ6PFR5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tra2aQ6PFR5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tra2aQ6PFR5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.23■□□□□ 0.51
Tra2aQ6PFR5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tra2aQ6PFR5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tra2aQ6PFR5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Gm6433-201ENSMUST00000118634 875 ntBASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tra2aQ6PFR5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tra2aQ6PFR5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tra2aQ6PFR5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.21■□□□□ 0.51
Tra2aQ6PFR5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tra2aQ6PFR5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tra2aQ6PFR5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tra2aQ6PFR5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tra2aQ6PFR5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tra2aQ6PFR5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tra2aQ6PFR5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Tra2aQ6PFR5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tra2aQ6PFR5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tra2aQ6PFR5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tra2aQ6PFR5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tra2aQ6PFR5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tra2aQ6PFR5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Tra2aQ6PFR5 Gm15375-201ENSMUST00000119510 849 ntBASIC18.2■□□□□ 0.5
Tra2aQ6PFR5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tra2aQ6PFR5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tra2aQ6PFR5 Gm38285-201ENSMUST00000192928 922 ntBASIC18.2■□□□□ 0.5
Tra2aQ6PFR5 Gm21814-202ENSMUST00000203277 873 ntBASIC18.2■□□□□ 0.5
Tra2aQ6PFR5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Tra2aQ6PFR5 Gm9987-201ENSMUST00000069768 567 ntBASIC18.2■□□□□ 0.5
Tra2aQ6PFR5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tra2aQ6PFR5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tra2aQ6PFR5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tra2aQ6PFR5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Tra2aQ6PFR5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tra2aQ6PFR5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.19■□□□□ 0.5
Tra2aQ6PFR5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tra2aQ6PFR5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tra2aQ6PFR5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tra2aQ6PFR5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tra2aQ6PFR5 Gm5417-201ENSMUST00000079706 384 ntBASIC18.19■□□□□ 0.5
Tra2aQ6PFR5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tra2aQ6PFR5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tra2aQ6PFR5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tra2aQ6PFR5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Tra2aQ6PFR5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tra2aQ6PFR5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tra2aQ6PFR5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tra2aQ6PFR5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tra2aQ6PFR5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tra2aQ6PFR5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Tra2aQ6PFR5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tra2aQ6PFR5 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.18■□□□□ 0.5
Tra2aQ6PFR5 Gm43183-201ENSMUST00000200632 547 ntBASIC18.18■□□□□ 0.5
Tra2aQ6PFR5 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.18■□□□□ 0.5
Tra2aQ6PFR5 Gm18025-201ENSMUST00000221733 862 ntBASIC18.18■□□□□ 0.5
Tra2aQ6PFR5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tra2aQ6PFR5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tra2aQ6PFR5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Tra2aQ6PFR5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Tra2aQ6PFR5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.17■□□□□ 0.5
Tra2aQ6PFR5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tra2aQ6PFR5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tra2aQ6PFR5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tra2aQ6PFR5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tra2aQ6PFR5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tra2aQ6PFR5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tra2aQ6PFR5 Mir6349-201ENSMUST00000184059 97 ntBASIC18.17■□□□□ 0.5
Tra2aQ6PFR5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.17■□□□□ 0.5
Tra2aQ6PFR5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tra2aQ6PFR5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tra2aQ6PFR5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tra2aQ6PFR5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tra2aQ6PFR5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms