Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcd3Q6P9Z1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcd3Q6P9Z1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Smarcd3Q6P9Z1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd3Q6P9Z1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd3Q6P9Z1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd3Q6P9Z1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Smarcd3Q6P9Z1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd3Q6P9Z1 Gm11421-201ENSMUST00000122124 294 ntBASIC17.04■□□□□ 0.32
Smarcd3Q6P9Z1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Smarcd3Q6P9Z1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd3Q6P9Z1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd3Q6P9Z1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd3Q6P9Z1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcd3Q6P9Z1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Smad6-203ENSMUST00000179458 273 ntBASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Gm21956-201ENSMUST00000179946 522 ntBASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcd3Q6P9Z1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 Rarb-207ENSMUST00000225921 2756 ntBASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 Mir7075-201ENSMUST00000184187 82 ntBASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd3Q6P9Z1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcd3Q6P9Z1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Smarcd3Q6P9Z1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcd3Q6P9Z1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcd3Q6P9Z1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcd3Q6P9Z1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcd3Q6P9Z1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcd3Q6P9Z1 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.02■□□□□ 0.31
Smarcd3Q6P9Z1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcd3Q6P9Z1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd3Q6P9Z1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Dmtn-210ENSMUST00000228824 2377 ntBASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Gm10461-201ENSMUST00000202073 4786 ntBASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Gm7860-201ENSMUST00000121190 879 ntBASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Grk6-206ENSMUST00000224995 2971 ntBASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms