Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr1Q64729 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr1Q64729 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr1Q64729 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr1Q64729 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr1Q64729 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.18■□□□□ 0.02
Tgfbr1Q64729 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Tgfbr1Q64729 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.18■□□□□ 0.02
Tgfbr1Q64729 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr1Q64729 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr1Q64729 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr1Q64729 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr1Q64729 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr1Q64729 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.17■□□□□ 0.02
Tgfbr1Q64729 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tgfbr1Q64729 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Gm12922-201ENSMUST00000120626 809 ntBASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tgfbr1Q64729 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tgfbr1Q64729 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.14■□□□□ 0.01
Tgfbr1Q64729 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr1Q64729 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tgfbr1Q64729 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Tgfbr1Q64729 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr1Q64729 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr1Q64729 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr1Q64729 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr1Q64729 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr1Q64729 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr1Q64729 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr1Q64729 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tgfbr1Q64729 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tgfbr1Q64729 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Tgfbr1Q64729 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr1Q64729 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr1Q64729 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr1Q64729 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.13■□□□□ 0.01
Tgfbr1Q64729 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr1Q64729 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr1Q64729 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr1Q64729 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr1Q64729 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.13■□□□□ 0.01
Tgfbr1Q64729 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.13■□□□□ 0.01
Tgfbr1Q64729 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr1Q64729 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tgfbr1Q64729 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms