Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sim1Q61045 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sim1Q61045 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sim1Q61045 Gm6576-201ENSMUST00000169678 883 ntBASIC18.42■□□□□ 0.54
Sim1Q61045 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Sim1Q61045 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Sim1Q61045 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sim1Q61045 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Sim1Q61045 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Sim1Q61045 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Sim1Q61045 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sim1Q61045 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sim1Q61045 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sim1Q61045 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Sim1Q61045 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sim1Q61045 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Sim1Q61045 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sim1Q61045 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sim1Q61045 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sim1Q61045 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sim1Q61045 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sim1Q61045 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sim1Q61045 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sim1Q61045 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.41■□□□□ 0.54
Sim1Q61045 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.41■□□□□ 0.54
Sim1Q61045 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sim1Q61045 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sim1Q61045 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sim1Q61045 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sim1Q61045 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sim1Q61045 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sim1Q61045 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sim1Q61045 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sim1Q61045 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sim1Q61045 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sim1Q61045 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sim1Q61045 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sim1Q61045 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Sim1Q61045 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.4■□□□□ 0.54
Sim1Q61045 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Sim1Q61045 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.4■□□□□ 0.54
Sim1Q61045 Rab3c-203ENSMUST00000224180 967 ntBASIC18.4■□□□□ 0.54
Sim1Q61045 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Sim1Q61045 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.4■□□□□ 0.54
Sim1Q61045 Gm27275-201ENSMUST00000184318 272 ntBASIC18.39■□□□□ 0.53
Sim1Q61045 Gm26524-201ENSMUST00000192339 390 ntBASIC18.39■□□□□ 0.53
Sim1Q61045 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sim1Q61045 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sim1Q61045 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sim1Q61045 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sim1Q61045 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sim1Q61045 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sim1Q61045 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sim1Q61045 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sim1Q61045 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sim1Q61045 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.38■□□□□ 0.53
Sim1Q61045 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sim1Q61045 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Sim1Q61045 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sim1Q61045 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.38■□□□□ 0.53
Sim1Q61045 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.38■□□□□ 0.53
Sim1Q61045 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sim1Q61045 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sim1Q61045 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sim1Q61045 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sim1Q61045 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sim1Q61045 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sim1Q61045 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sim1Q61045 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sim1Q61045 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sim1Q61045 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sim1Q61045 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sim1Q61045 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sim1Q61045 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.37■□□□□ 0.53
Sim1Q61045 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.37■□□□□ 0.53
Sim1Q61045 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sim1Q61045 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sim1Q61045 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sim1Q61045 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.37■□□□□ 0.53
Sim1Q61045 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sim1Q61045 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sim1Q61045 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sim1Q61045 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sim1Q61045 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Sim1Q61045 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Sim1Q61045 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sim1Q61045 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sim1Q61045 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sim1Q61045 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sim1Q61045 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sim1Q61045 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sim1Q61045 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sim1Q61045 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sim1Q61045 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sim1Q61045 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sim1Q61045 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sim1Q61045 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sim1Q61045 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sim1Q61045 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.35■□□□□ 0.53
Sim1Q61045 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms