Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim38Q5SZ99 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim38Q5SZ99 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.32■□□□□ 0.68
Trim38Q5SZ99 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.32■□□□□ 0.68
Trim38Q5SZ99 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trim38Q5SZ99 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim38Q5SZ99 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim38Q5SZ99 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim38Q5SZ99 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim38Q5SZ99 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim38Q5SZ99 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Trim38Q5SZ99 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim38Q5SZ99 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim38Q5SZ99 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim38Q5SZ99 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim38Q5SZ99 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim38Q5SZ99 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim38Q5SZ99 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim38Q5SZ99 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim38Q5SZ99 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim38Q5SZ99 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim38Q5SZ99 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim38Q5SZ99 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim38Q5SZ99 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim38Q5SZ99 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim38Q5SZ99 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim38Q5SZ99 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.3■□□□□ 0.68
Trim38Q5SZ99 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim38Q5SZ99 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim38Q5SZ99 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim38Q5SZ99 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.3■□□□□ 0.68
Trim38Q5SZ99 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Trim38Q5SZ99 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.3■□□□□ 0.68
Trim38Q5SZ99 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim38Q5SZ99 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim38Q5SZ99 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim38Q5SZ99 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim38Q5SZ99 Gm13234-201ENSMUST00000120010 747 ntBASIC19.29■□□□□ 0.68
Trim38Q5SZ99 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim38Q5SZ99 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim38Q5SZ99 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim38Q5SZ99 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim38Q5SZ99 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim38Q5SZ99 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim38Q5SZ99 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.27■□□□□ 0.68
Trim38Q5SZ99 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim38Q5SZ99 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim38Q5SZ99 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim38Q5SZ99 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim38Q5SZ99 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim38Q5SZ99 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.27■□□□□ 0.68
Trim38Q5SZ99 Gm10493-201ENSMUST00000097270 612 ntBASIC19.27■□□□□ 0.68
Trim38Q5SZ99 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim38Q5SZ99 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Trim38Q5SZ99 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim38Q5SZ99 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim38Q5SZ99 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim38Q5SZ99 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Trim38Q5SZ99 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.26■□□□□ 0.67
Trim38Q5SZ99 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim38Q5SZ99 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim38Q5SZ99 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.26■□□□□ 0.67
Trim38Q5SZ99 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim38Q5SZ99 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim38Q5SZ99 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Trim38Q5SZ99 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim38Q5SZ99 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim38Q5SZ99 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim38Q5SZ99 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim38Q5SZ99 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Trim38Q5SZ99 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim38Q5SZ99 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim38Q5SZ99 Gm13534-201ENSMUST00000121169 513 ntBASIC19.25■□□□□ 0.67
Trim38Q5SZ99 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim38Q5SZ99 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim38Q5SZ99 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Trim38Q5SZ99 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim38Q5SZ99 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim38Q5SZ99 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim38Q5SZ99 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim38Q5SZ99 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim38Q5SZ99 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.24■□□□□ 0.67
Trim38Q5SZ99 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim38Q5SZ99 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms