Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna2d4Q5RJF7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.7■□□□□ 0.9
Cacna2d4Q5RJF7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna2d4Q5RJF7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna2d4Q5RJF7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna2d4Q5RJF7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna2d4Q5RJF7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna2d4Q5RJF7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna2d4Q5RJF7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna2d4Q5RJF7 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.69■□□□□ 0.9
Cacna2d4Q5RJF7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna2d4Q5RJF7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna2d4Q5RJF7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.69■□□□□ 0.9
Cacna2d4Q5RJF7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna2d4Q5RJF7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna2d4Q5RJF7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Gm27405-201ENSMUST00000184201 112 ntBASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Gm6420-201ENSMUST00000193885 723 ntBASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna2d4Q5RJF7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Nespas-201ENSMUST00000143738 1083 ntBASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna2d4Q5RJF7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna2d4Q5RJF7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna2d4Q5RJF7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna2d4Q5RJF7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna2d4Q5RJF7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna2d4Q5RJF7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.66■□□□□ 0.9
Cacna2d4Q5RJF7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna2d4Q5RJF7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.66■□□□□ 0.9
Cacna2d4Q5RJF7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna2d4Q5RJF7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna2d4Q5RJF7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna2d4Q5RJF7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.66■□□□□ 0.9
Cacna2d4Q5RJF7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna2d4Q5RJF7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cacna2d4Q5RJF7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna2d4Q5RJF7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna2d4Q5RJF7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna2d4Q5RJF7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.65■□□□□ 0.9
Cacna2d4Q5RJF7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna2d4Q5RJF7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna2d4Q5RJF7 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.65■□□□□ 0.9
Cacna2d4Q5RJF7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.65■□□□□ 0.9
Cacna2d4Q5RJF7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna2d4Q5RJF7 Gm7291-201ENSMUST00000199147 382 ntBASIC20.65■□□□□ 0.9
Cacna2d4Q5RJF7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna2d4Q5RJF7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cacna2d4Q5RJF7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna2d4Q5RJF7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna2d4Q5RJF7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna2d4Q5RJF7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna2d4Q5RJF7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cacna2d4Q5RJF7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna2d4Q5RJF7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna2d4Q5RJF7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna2d4Q5RJF7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna2d4Q5RJF7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna2d4Q5RJF7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna2d4Q5RJF7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cacna2d4Q5RJF7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cacna2d4Q5RJF7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cacna2d4Q5RJF7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna2d4Q5RJF7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.63■□□□□ 0.89
Cacna2d4Q5RJF7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms