Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Urb1Q571H0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.09■□□□□ 0.33
Urb1Q571H0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Urb1Q571H0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.09■□□□□ 0.33
Urb1Q571H0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Urb1Q571H0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Urb1Q571H0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Urb1Q571H0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Urb1Q571H0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Urb1Q571H0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Urb1Q571H0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Urb1Q571H0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Urb1Q571H0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Urb1Q571H0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Urb1Q571H0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Urb1Q571H0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Urb1Q571H0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Urb1Q571H0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Urb1Q571H0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Urb1Q571H0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Urb1Q571H0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Urb1Q571H0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.08■□□□□ 0.33
Urb1Q571H0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Urb1Q571H0 Gm18666-201ENSMUST00000190039 958 ntBASIC17.08■□□□□ 0.33
Urb1Q571H0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.08■□□□□ 0.33
Urb1Q571H0 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.08■□□□□ 0.33
Urb1Q571H0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Urb1Q571H0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Urb1Q571H0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.08■□□□□ 0.32
Urb1Q571H0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Urb1Q571H0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Urb1Q571H0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Urb1Q571H0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Urb1Q571H0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.08■□□□□ 0.32
Urb1Q571H0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.08■□□□□ 0.32
Urb1Q571H0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Urb1Q571H0 Gm5417-201ENSMUST00000079706 384 ntBASIC17.08■□□□□ 0.32
Urb1Q571H0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Urb1Q571H0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Urb1Q571H0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Urb1Q571H0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Urb1Q571H0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Urb1Q571H0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.07■□□□□ 0.32
Urb1Q571H0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Urb1Q571H0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Urb1Q571H0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.07■□□□□ 0.32
Urb1Q571H0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Urb1Q571H0 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.06■□□□□ 0.32
Urb1Q571H0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Urb1Q571H0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Urb1Q571H0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Urb1Q571H0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Urb1Q571H0 Gm7367-201ENSMUST00000057611 492 ntBASIC17.06■□□□□ 0.32
Urb1Q571H0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Urb1Q571H0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Urb1Q571H0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Urb1Q571H0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.06■□□□□ 0.32
Urb1Q571H0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Urb1Q571H0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.06■□□□□ 0.32
Urb1Q571H0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Urb1Q571H0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Urb1Q571H0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.05■□□□□ 0.32
Urb1Q571H0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Urb1Q571H0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Urb1Q571H0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Urb1Q571H0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Urb1Q571H0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Urb1Q571H0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Urb1Q571H0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Urb1Q571H0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Urb1Q571H0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
Urb1Q571H0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Urb1Q571H0 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.04■□□□□ 0.32
Urb1Q571H0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Urb1Q571H0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.04■□□□□ 0.32
Urb1Q571H0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Urb1Q571H0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Urb1Q571H0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Urb1Q571H0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Urb1Q571H0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Urb1Q571H0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Urb1Q571H0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Urb1Q571H0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.04■□□□□ 0.32
Urb1Q571H0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Urb1Q571H0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Urb1Q571H0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Urb1Q571H0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.04■□□□□ 0.32
Urb1Q571H0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Urb1Q571H0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Urb1Q571H0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Urb1Q571H0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Urb1Q571H0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Urb1Q571H0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Urb1Q571H0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Urb1Q571H0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.03■□□□□ 0.32
Urb1Q571H0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Urb1Q571H0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.03■□□□□ 0.32
Urb1Q571H0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Urb1Q571H0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Urb1Q571H0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms