Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim80Q3V061 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.16■□□□□ 0.66
Trim80Q3V061 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trim80Q3V061 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim80Q3V061 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim80Q3V061 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim80Q3V061 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim80Q3V061 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim80Q3V061 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim80Q3V061 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim80Q3V061 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim80Q3V061 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim80Q3V061 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.15■□□□□ 0.66
Trim80Q3V061 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim80Q3V061 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim80Q3V061 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim80Q3V061 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim80Q3V061 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim80Q3V061 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trim80Q3V061 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim80Q3V061 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.15■□□□□ 0.66
Trim80Q3V061 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.15■□□□□ 0.66
Trim80Q3V061 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim80Q3V061 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim80Q3V061 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trim80Q3V061 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim80Q3V061 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim80Q3V061 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim80Q3V061 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim80Q3V061 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim80Q3V061 Gm43173-201ENSMUST00000202246 593 ntBASIC19.14■□□□□ 0.65
Trim80Q3V061 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim80Q3V061 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim80Q3V061 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Trim80Q3V061 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim80Q3V061 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim80Q3V061 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim80Q3V061 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim80Q3V061 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Trim80Q3V061 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim80Q3V061 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim80Q3V061 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trim80Q3V061 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim80Q3V061 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim80Q3V061 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim80Q3V061 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim80Q3V061 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.13■□□□□ 0.65
Trim80Q3V061 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim80Q3V061 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim80Q3V061 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim80Q3V061 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.13■□□□□ 0.65
Trim80Q3V061 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim80Q3V061 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim80Q3V061 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim80Q3V061 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim80Q3V061 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim80Q3V061 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim80Q3V061 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trim80Q3V061 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim80Q3V061 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim80Q3V061 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim80Q3V061 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim80Q3V061 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim80Q3V061 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim80Q3V061 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trim80Q3V061 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim80Q3V061 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim80Q3V061 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim80Q3V061 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim80Q3V061 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim80Q3V061 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim80Q3V061 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Trim80Q3V061 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim80Q3V061 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim80Q3V061 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim80Q3V061 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
Trim80Q3V061 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim80Q3V061 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trim80Q3V061 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim80Q3V061 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim80Q3V061 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim80Q3V061 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim80Q3V061 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim80Q3V061 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim80Q3V061 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.11■□□□□ 0.65
Trim80Q3V061 AA386476-201ENSMUST00000098781 1665 ntBASIC19.11■□□□□ 0.65
Trim80Q3V061 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.11■□□□□ 0.65
Trim80Q3V061 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim80Q3V061 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim80Q3V061 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim80Q3V061 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim80Q3V061 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim80Q3V061 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim80Q3V061 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trim80Q3V061 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.1■□□□□ 0.65
Trim80Q3V061 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim80Q3V061 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.1■□□□□ 0.65
Trim80Q3V061 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim80Q3V061 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim80Q3V061 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 143.6 ms