Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.59■■□□□ 1.05
Cdkl5Q3UTQ8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdkl5Q3UTQ8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cdkl5Q3UTQ8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.59■■□□□ 1.05
Cdkl5Q3UTQ8 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.59■■□□□ 1.05
Cdkl5Q3UTQ8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
Cdkl5Q3UTQ8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdkl5Q3UTQ8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdkl5Q3UTQ8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdkl5Q3UTQ8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cdkl5Q3UTQ8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cdkl5Q3UTQ8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.58■■□□□ 1.05
Cdkl5Q3UTQ8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdkl5Q3UTQ8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.58■■□□□ 1.05
Cdkl5Q3UTQ8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.58■■□□□ 1.05
Cdkl5Q3UTQ8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdkl5Q3UTQ8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdkl5Q3UTQ8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cdkl5Q3UTQ8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkl5Q3UTQ8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkl5Q3UTQ8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkl5Q3UTQ8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkl5Q3UTQ8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkl5Q3UTQ8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkl5Q3UTQ8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkl5Q3UTQ8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkl5Q3UTQ8 Gm10033-202ENSMUST00000211874 928 ntBASIC21.57■■□□□ 1.04
Cdkl5Q3UTQ8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkl5Q3UTQ8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkl5Q3UTQ8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkl5Q3UTQ8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.57■■□□□ 1.04
Cdkl5Q3UTQ8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
Cdkl5Q3UTQ8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkl5Q3UTQ8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkl5Q3UTQ8 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 Gm42642-201ENSMUST00000200683 355 ntBASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cdkl5Q3UTQ8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Cdkl5Q3UTQ8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cdkl5Q3UTQ8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdkl5Q3UTQ8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdkl5Q3UTQ8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdkl5Q3UTQ8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Cdkl5Q3UTQ8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdkl5Q3UTQ8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdkl5Q3UTQ8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdkl5Q3UTQ8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cdkl5Q3UTQ8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cdkl5Q3UTQ8 Gm18284-201ENSMUST00000172604 624 ntBASIC21.54■■□□□ 1.04
Cdkl5Q3UTQ8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdkl5Q3UTQ8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdkl5Q3UTQ8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdkl5Q3UTQ8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Cdkl5Q3UTQ8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Cdkl5Q3UTQ8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdkl5Q3UTQ8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Cdkl5Q3UTQ8 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.53■■□□□ 1.04
Cdkl5Q3UTQ8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cdkl5Q3UTQ8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdkl5Q3UTQ8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdkl5Q3UTQ8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.52■■□□□ 1.04
Cdkl5Q3UTQ8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdkl5Q3UTQ8 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.52■■□□□ 1.04
Cdkl5Q3UTQ8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cdkl5Q3UTQ8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.52■■□□□ 1.04
Cdkl5Q3UTQ8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cdkl5Q3UTQ8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.52■■□□□ 1.04
Cdkl5Q3UTQ8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.52■■□□□ 1.04
Cdkl5Q3UTQ8 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.52■■□□□ 1.04
Cdkl5Q3UTQ8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdkl5Q3UTQ8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cdkl5Q3UTQ8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdkl5Q3UTQ8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdkl5Q3UTQ8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cdkl5Q3UTQ8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Cdkl5Q3UTQ8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cdkl5Q3UTQ8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdkl5Q3UTQ8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdkl5Q3UTQ8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdkl5Q3UTQ8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdkl5Q3UTQ8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdkl5Q3UTQ8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cdkl5Q3UTQ8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdkl5Q3UTQ8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.51■■□□□ 1.03
Cdkl5Q3UTQ8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Cdkl5Q3UTQ8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms