Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Gm11599-201ENSMUST00000118720 878 ntBASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cks1brtQ3UNC9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1brtQ3UNC9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1brtQ3UNC9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.48□□□□□ -0.25
Cks1brtQ3UNC9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Cks1brtQ3UNC9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1brtQ3UNC9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC13.48□□□□□ -0.25
Cks1brtQ3UNC9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC13.48□□□□□ -0.25
Cks1brtQ3UNC9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1brtQ3UNC9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1brtQ3UNC9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1brtQ3UNC9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1brtQ3UNC9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cks1brtQ3UNC9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1brtQ3UNC9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1brtQ3UNC9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1brtQ3UNC9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1brtQ3UNC9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1brtQ3UNC9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cks1brtQ3UNC9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1brtQ3UNC9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1brtQ3UNC9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1brtQ3UNC9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1brtQ3UNC9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1brtQ3UNC9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1brtQ3UNC9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1brtQ3UNC9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1brtQ3UNC9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cks1brtQ3UNC9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1brtQ3UNC9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1brtQ3UNC9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1brtQ3UNC9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cks1brtQ3UNC9 Gm7432-201ENSMUST00000210343 879 ntBASIC13.46□□□□□ -0.25
Cks1brtQ3UNC9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.46□□□□□ -0.25
Cks1brtQ3UNC9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC13.46□□□□□ -0.25
Cks1brtQ3UNC9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.46□□□□□ -0.25
Cks1brtQ3UNC9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.46□□□□□ -0.25
Cks1brtQ3UNC9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Cks1brtQ3UNC9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cks1brtQ3UNC9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Cks1brtQ3UNC9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Cks1brtQ3UNC9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cks1brtQ3UNC9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.46□□□□□ -0.26
Cks1brtQ3UNC9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cks1brtQ3UNC9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms