Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smcr8Q3UMB5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smcr8Q3UMB5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smcr8Q3UMB5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.96■□□□□ 0.79
Smcr8Q3UMB5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smcr8Q3UMB5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smcr8Q3UMB5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Smcr8Q3UMB5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smcr8Q3UMB5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smcr8Q3UMB5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smcr8Q3UMB5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.95■□□□□ 0.78
Smcr8Q3UMB5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smcr8Q3UMB5 Gm13168-201ENSMUST00000121771 632 ntBASIC19.95■□□□□ 0.78
Smcr8Q3UMB5 Trmt13-210ENSMUST00000198454 880 ntBASIC19.95■□□□□ 0.78
Smcr8Q3UMB5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.95■□□□□ 0.78
Smcr8Q3UMB5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Smcr8Q3UMB5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smcr8Q3UMB5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smcr8Q3UMB5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smcr8Q3UMB5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Smcr8Q3UMB5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smcr8Q3UMB5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smcr8Q3UMB5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Smcr8Q3UMB5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smcr8Q3UMB5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Smcr8Q3UMB5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smcr8Q3UMB5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Smcr8Q3UMB5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.94■□□□□ 0.78
Smcr8Q3UMB5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.93■□□□□ 0.78
Smcr8Q3UMB5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smcr8Q3UMB5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smcr8Q3UMB5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.93■□□□□ 0.78
Smcr8Q3UMB5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.93■□□□□ 0.78
Smcr8Q3UMB5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smcr8Q3UMB5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smcr8Q3UMB5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smcr8Q3UMB5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smcr8Q3UMB5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smcr8Q3UMB5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smcr8Q3UMB5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smcr8Q3UMB5 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Smcr8Q3UMB5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smcr8Q3UMB5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smcr8Q3UMB5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smcr8Q3UMB5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smcr8Q3UMB5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.92■□□□□ 0.78
Smcr8Q3UMB5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smcr8Q3UMB5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smcr8Q3UMB5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smcr8Q3UMB5 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.92■□□□□ 0.78
Smcr8Q3UMB5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smcr8Q3UMB5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smcr8Q3UMB5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smcr8Q3UMB5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smcr8Q3UMB5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smcr8Q3UMB5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smcr8Q3UMB5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.91■□□□□ 0.78
Smcr8Q3UMB5 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.91■□□□□ 0.78
Smcr8Q3UMB5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smcr8Q3UMB5 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.91■□□□□ 0.78
Smcr8Q3UMB5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smcr8Q3UMB5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smcr8Q3UMB5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smcr8Q3UMB5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smcr8Q3UMB5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smcr8Q3UMB5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Smcr8Q3UMB5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smcr8Q3UMB5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smcr8Q3UMB5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smcr8Q3UMB5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.9■□□□□ 0.78
Smcr8Q3UMB5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.9■□□□□ 0.78
Smcr8Q3UMB5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.9■□□□□ 0.78
Smcr8Q3UMB5 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.9■□□□□ 0.78
Smcr8Q3UMB5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smcr8Q3UMB5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smcr8Q3UMB5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smcr8Q3UMB5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.9■□□□□ 0.78
Smcr8Q3UMB5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Smcr8Q3UMB5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smcr8Q3UMB5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smcr8Q3UMB5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smcr8Q3UMB5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smcr8Q3UMB5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smcr8Q3UMB5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smcr8Q3UMB5 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smcr8Q3UMB5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Smcr8Q3UMB5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.89■□□□□ 0.77
Smcr8Q3UMB5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Smcr8Q3UMB5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smcr8Q3UMB5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smcr8Q3UMB5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.89■□□□□ 0.77
Smcr8Q3UMB5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smcr8Q3UMB5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smcr8Q3UMB5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Smcr8Q3UMB5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smcr8Q3UMB5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smcr8Q3UMB5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smcr8Q3UMB5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smcr8Q3UMB5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smcr8Q3UMB5 Gm12896-201ENSMUST00000118430 226 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms