Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rapgef1Q3UHC1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 Gm13234-201ENSMUST00000120010 747 ntBASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rapgef1Q3UHC1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rapgef1Q3UHC1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rapgef1Q3UHC1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rapgef1Q3UHC1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rapgef1Q3UHC1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rapgef1Q3UHC1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rapgef1Q3UHC1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rapgef1Q3UHC1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rapgef1Q3UHC1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rapgef1Q3UHC1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rapgef1Q3UHC1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rapgef1Q3UHC1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Rapgef1Q3UHC1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rapgef1Q3UHC1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Rapgef1Q3UHC1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rapgef1Q3UHC1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rapgef1Q3UHC1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rapgef1Q3UHC1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rapgef1Q3UHC1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.26■□□□□ 0.83
Rapgef1Q3UHC1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.26■□□□□ 0.83
Rapgef1Q3UHC1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rapgef1Q3UHC1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rapgef1Q3UHC1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.26■□□□□ 0.83
Rapgef1Q3UHC1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rapgef1Q3UHC1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rapgef1Q3UHC1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rapgef1Q3UHC1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rapgef1Q3UHC1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rapgef1Q3UHC1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rapgef1Q3UHC1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rapgef1Q3UHC1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.25■□□□□ 0.83
Rapgef1Q3UHC1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.25■□□□□ 0.83
Rapgef1Q3UHC1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rapgef1Q3UHC1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rapgef1Q3UHC1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rapgef1Q3UHC1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rapgef1Q3UHC1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rapgef1Q3UHC1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rapgef1Q3UHC1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rapgef1Q3UHC1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rapgef1Q3UHC1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rapgef1Q3UHC1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rapgef1Q3UHC1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.24■□□□□ 0.83
Rapgef1Q3UHC1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rapgef1Q3UHC1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rapgef1Q3UHC1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms