Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Xrra1Q3U3V8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 Gm13146-201ENSMUST00000118508 780 ntBASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Xrra1Q3U3V8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 BC021767-201ENSMUST00000126387 1716 ntBASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Xrra1Q3U3V8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Xrra1Q3U3V8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Xrra1Q3U3V8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Xrra1Q3U3V8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Xrra1Q3U3V8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Xrra1Q3U3V8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Xrra1Q3U3V8 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.72■□□□□ 0.43
Xrra1Q3U3V8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Xrra1Q3U3V8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Xrra1Q3U3V8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Xrra1Q3U3V8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Xrra1Q3U3V8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Xrra1Q3U3V8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Xrra1Q3U3V8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Xrra1Q3U3V8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Gm26571-201ENSMUST00000181399 666 ntBASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.71■□□□□ 0.43
Xrra1Q3U3V8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Xrra1Q3U3V8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Xrra1Q3U3V8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Xrra1Q3U3V8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.71■□□□□ 0.42
Xrra1Q3U3V8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Xrra1Q3U3V8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Xrra1Q3U3V8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Xrra1Q3U3V8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Xrra1Q3U3V8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.7■□□□□ 0.42
Xrra1Q3U3V8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.7■□□□□ 0.42
Xrra1Q3U3V8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Xrra1Q3U3V8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Xrra1Q3U3V8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Xrra1Q3U3V8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Xrra1Q3U3V8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Xrra1Q3U3V8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.7■□□□□ 0.42
Xrra1Q3U3V8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Xrra1Q3U3V8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Xrra1Q3U3V8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Xrra1Q3U3V8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Xrra1Q3U3V8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Xrra1Q3U3V8 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.69■□□□□ 0.42
Xrra1Q3U3V8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Xrra1Q3U3V8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Xrra1Q3U3V8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.69■□□□□ 0.42
Xrra1Q3U3V8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Xrra1Q3U3V8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.69■□□□□ 0.42
Xrra1Q3U3V8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms