Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SgcbP82349 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SgcbP82349 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SgcbP82349 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SgcbP82349 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcbP82349 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcbP82349 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcbP82349 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SgcbP82349 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcbP82349 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SgcbP82349 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SgcbP82349 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SgcbP82349 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SgcbP82349 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SgcbP82349 Gm12933-201ENSMUST00000120203 872 ntBASIC16.58■□□□□ 0.24
SgcbP82349 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.58■□□□□ 0.24
SgcbP82349 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcbP82349 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SgcbP82349 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcbP82349 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcbP82349 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcbP82349 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.58■□□□□ 0.24
SgcbP82349 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcbP82349 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.58■□□□□ 0.24
SgcbP82349 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.58■□□□□ 0.24
SgcbP82349 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SgcbP82349 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcbP82349 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcbP82349 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcbP82349 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SgcbP82349 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SgcbP82349 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcbP82349 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcbP82349 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.57■□□□□ 0.24
SgcbP82349 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.57■□□□□ 0.24
SgcbP82349 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SgcbP82349 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.57■□□□□ 0.24
SgcbP82349 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SgcbP82349 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SgcbP82349 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.57■□□□□ 0.24
SgcbP82349 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.57■□□□□ 0.24
SgcbP82349 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcbP82349 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcbP82349 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
SgcbP82349 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SgcbP82349 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcbP82349 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcbP82349 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SgcbP82349 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SgcbP82349 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcbP82349 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SgcbP82349 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcbP82349 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcbP82349 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SgcbP82349 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcbP82349 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcbP82349 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcbP82349 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcbP82349 Gm7290-201ENSMUST00000104990 617 ntBASIC16.56■□□□□ 0.24
SgcbP82349 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcbP82349 Gm12918-201ENSMUST00000120234 636 ntBASIC16.56■□□□□ 0.24
SgcbP82349 Gm15710-201ENSMUST00000121821 636 ntBASIC16.56■□□□□ 0.24
SgcbP82349 Gm29257-201ENSMUST00000186115 639 ntBASIC16.56■□□□□ 0.24
SgcbP82349 Gm5075-201ENSMUST00000196916 622 ntBASIC16.56■□□□□ 0.24
SgcbP82349 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SgcbP82349 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.56■□□□□ 0.24
SgcbP82349 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.56■□□□□ 0.24
SgcbP82349 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.56■□□□□ 0.24
SgcbP82349 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SgcbP82349 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SgcbP82349 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcbP82349 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SgcbP82349 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcbP82349 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcbP82349 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcbP82349 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcbP82349 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.56■□□□□ 0.24
SgcbP82349 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SgcbP82349 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SgcbP82349 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcbP82349 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcbP82349 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcbP82349 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SgcbP82349 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcbP82349 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcbP82349 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.55■□□□□ 0.24
SgcbP82349 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
SgcbP82349 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcbP82349 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcbP82349 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcbP82349 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcbP82349 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcbP82349 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcbP82349 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcbP82349 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.54■□□□□ 0.24
SgcbP82349 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SgcbP82349 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcbP82349 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcbP82349 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcbP82349 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms