Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgcs2P54869 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Hmgcs2P54869 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgcs2P54869 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgcs2P54869 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgcs2P54869 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgcs2P54869 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgcs2P54869 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.8■□□□□ 0.92
Hmgcs2P54869 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgcs2P54869 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Hmgcs2P54869 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Hmgcs2P54869 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Hmgcs2P54869 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgcs2P54869 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgcs2P54869 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgcs2P54869 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgcs2P54869 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgcs2P54869 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgcs2P54869 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgcs2P54869 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Hmgcs2P54869 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgcs2P54869 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgcs2P54869 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgcs2P54869 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgcs2P54869 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgcs2P54869 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgcs2P54869 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgcs2P54869 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgcs2P54869 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.78■□□□□ 0.92
Hmgcs2P54869 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.78■□□□□ 0.92
Hmgcs2P54869 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.78■□□□□ 0.92
Hmgcs2P54869 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgcs2P54869 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgcs2P54869 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgcs2P54869 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgcs2P54869 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgcs2P54869 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgcs2P54869 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.76■□□□□ 0.91
Hmgcs2P54869 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgcs2P54869 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgcs2P54869 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.76■□□□□ 0.91
Hmgcs2P54869 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgcs2P54869 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgcs2P54869 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgcs2P54869 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgcs2P54869 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Hmgcs2P54869 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgcs2P54869 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Hmgcs2P54869 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgcs2P54869 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.75■□□□□ 0.91
Hmgcs2P54869 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Hmgcs2P54869 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.75■□□□□ 0.91
Hmgcs2P54869 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgcs2P54869 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.75■□□□□ 0.91
Hmgcs2P54869 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgcs2P54869 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Hmgcs2P54869 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgcs2P54869 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgcs2P54869 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgcs2P54869 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Hmgcs2P54869 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgcs2P54869 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Hmgcs2P54869 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Hmgcs2P54869 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Hmgcs2P54869 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgcs2P54869 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.74■□□□□ 0.91
Hmgcs2P54869 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.74■□□□□ 0.91
Hmgcs2P54869 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.74■□□□□ 0.91
Hmgcs2P54869 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Hmgcs2P54869 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgcs2P54869 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgcs2P54869 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Hmgcs2P54869 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.74■□□□□ 0.91
Hmgcs2P54869 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgcs2P54869 Mtag2-201ENSMUST00000058665 714 ntBASIC20.74■□□□□ 0.91
Hmgcs2P54869 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgcs2P54869 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgcs2P54869 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgcs2P54869 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Hmgcs2P54869 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgcs2P54869 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgcs2P54869 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Hmgcs2P54869 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.73■□□□□ 0.91
Hmgcs2P54869 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms