Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox3P53784 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox3P53784 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sox3P53784 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.72■□□□□ 0.43
Sox3P53784 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.72■□□□□ 0.43
Sox3P53784 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sox3P53784 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox3P53784 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox3P53784 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox3P53784 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sox3P53784 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox3P53784 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox3P53784 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox3P53784 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.72■□□□□ 0.43
Sox3P53784 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox3P53784 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox3P53784 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox3P53784 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
Sox3P53784 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox3P53784 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox3P53784 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Sox3P53784 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox3P53784 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox3P53784 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox3P53784 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox3P53784 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox3P53784 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sox3P53784 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Sox3P53784 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Sox3P53784 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox3P53784 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Sox3P53784 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Sox3P53784 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox3P53784 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox3P53784 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox3P53784 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Sox3P53784 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sox3P53784 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sox3P53784 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.7■□□□□ 0.42
Sox3P53784 Gm6420-201ENSMUST00000193885 723 ntBASIC17.7■□□□□ 0.42
Sox3P53784 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.7■□□□□ 0.42
Sox3P53784 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox3P53784 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Sox3P53784 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox3P53784 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox3P53784 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox3P53784 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox3P53784 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox3P53784 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox3P53784 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox3P53784 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox3P53784 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox3P53784 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox3P53784 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Sox3P53784 Gm6576-201ENSMUST00000169678 883 ntBASIC17.69■□□□□ 0.42
Sox3P53784 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox3P53784 Mir6236-201ENSMUST00000184437 123 ntBASIC17.69■□□□□ 0.42
Sox3P53784 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.69■□□□□ 0.42
Sox3P53784 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sox3P53784 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox3P53784 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox3P53784 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox3P53784 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox3P53784 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sox3P53784 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox3P53784 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox3P53784 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sox3P53784 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.68■□□□□ 0.42
Sox3P53784 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Sox3P53784 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.68■□□□□ 0.42
Sox3P53784 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.68■□□□□ 0.42
Sox3P53784 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox3P53784 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox3P53784 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox3P53784 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sox3P53784 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Sox3P53784 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox3P53784 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox3P53784 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sox3P53784 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sox3P53784 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox3P53784 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox3P53784 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox3P53784 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox3P53784 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sox3P53784 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.67■□□□□ 0.42
Sox3P53784 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.67■□□□□ 0.42
Sox3P53784 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox3P53784 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.67■□□□□ 0.42
Sox3P53784 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sox3P53784 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox3P53784 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox3P53784 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox3P53784 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.67■□□□□ 0.42
Sox3P53784 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.67■□□□□ 0.42
Sox3P53784 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox3P53784 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox3P53784 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sox3P53784 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sox3P53784 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms