Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx4P53776 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Lhx4P53776 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Lhx4P53776 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Lhx4P53776 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Lhx4P53776 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx4P53776 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx4P53776 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx4P53776 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
Lhx4P53776 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx4P53776 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx4P53776 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx4P53776 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Lhx4P53776 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx4P53776 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.68■□□□□ 0.1
Lhx4P53776 AV356131-201ENSMUST00000206201 750 ntBASIC15.68■□□□□ 0.1
Lhx4P53776 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx4P53776 Gm10033-202ENSMUST00000211874 928 ntBASIC15.68■□□□□ 0.1
Lhx4P53776 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx4P53776 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Lhx4P53776 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx4P53776 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx4P53776 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
Lhx4P53776 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Lhx4P53776 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Lhx4P53776 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Lhx4P53776 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Lhx4P53776 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Lhx4P53776 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Lhx4P53776 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx4P53776 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
Lhx4P53776 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx4P53776 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx4P53776 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx4P53776 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Lhx4P53776 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx4P53776 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx4P53776 Gm27405-201ENSMUST00000184201 112 ntBASIC15.67■□□□□ 0.1
Lhx4P53776 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.67■□□□□ 0.1
Lhx4P53776 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Lhx4P53776 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.67■□□□□ 0.1
Lhx4P53776 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx4P53776 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.67■□□□□ 0.1
Lhx4P53776 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx4P53776 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx4P53776 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx4P53776 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx4P53776 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx4P53776 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx4P53776 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx4P53776 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Lhx4P53776 Gm13234-201ENSMUST00000120010 747 ntBASIC15.66■□□□□ 0.1
Lhx4P53776 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Lhx4P53776 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.66■□□□□ 0.1
Lhx4P53776 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx4P53776 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.66■□□□□ 0.1
Lhx4P53776 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Lhx4P53776 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx4P53776 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx4P53776 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx4P53776 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx4P53776 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx4P53776 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx4P53776 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.65■□□□□ 0.1
Lhx4P53776 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx4P53776 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.65■□□□□ 0.1
Lhx4P53776 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Lhx4P53776 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx4P53776 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.65■□□□□ 0.1
Lhx4P53776 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.65■□□□□ 0.1
Lhx4P53776 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx4P53776 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx4P53776 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx4P53776 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx4P53776 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Lhx4P53776 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Lhx4P53776 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx4P53776 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Lhx4P53776 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx4P53776 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Lhx4P53776 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx4P53776 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx4P53776 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx4P53776 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx4P53776 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx4P53776 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.64■□□□□ 0.09
Lhx4P53776 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx4P53776 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.64■□□□□ 0.09
Lhx4P53776 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx4P53776 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.64■□□□□ 0.09
Lhx4P53776 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx4P53776 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx4P53776 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Lhx4P53776 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Lhx4P53776 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx4P53776 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx4P53776 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lhx4P53776 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lhx4P53776 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lhx4P53776 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms