Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limk1P53668 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limk1P53668 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Limk1P53668 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Limk1P53668 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Limk1P53668 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limk1P53668 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Limk1P53668 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limk1P53668 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Limk1P53668 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.22■□□□□ 0.51
Limk1P53668 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limk1P53668 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limk1P53668 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
Limk1P53668 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Limk1P53668 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Limk1P53668 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Limk1P53668 Gm21362-201ENSMUST00000194272 928 ntBASIC18.21■□□□□ 0.51
Limk1P53668 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Limk1P53668 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Limk1P53668 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Limk1P53668 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Limk1P53668 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Limk1P53668 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Limk1P53668 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Limk1P53668 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.2■□□□□ 0.5
Limk1P53668 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Limk1P53668 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Limk1P53668 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.2■□□□□ 0.5
Limk1P53668 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Limk1P53668 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.2■□□□□ 0.5
Limk1P53668 Mir5122-201ENSMUST00000175004 89 ntBASIC18.2■□□□□ 0.5
Limk1P53668 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.2■□□□□ 0.5
Limk1P53668 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Limk1P53668 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.2■□□□□ 0.5
Limk1P53668 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Limk1P53668 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Limk1P53668 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.19■□□□□ 0.5
Limk1P53668 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Limk1P53668 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Limk1P53668 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Limk1P53668 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Limk1P53668 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Limk1P53668 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Limk1P53668 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.19■□□□□ 0.5
Limk1P53668 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.19■□□□□ 0.5
Limk1P53668 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.19■□□□□ 0.5
Limk1P53668 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Limk1P53668 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Limk1P53668 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Limk1P53668 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Limk1P53668 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Limk1P53668 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Limk1P53668 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.19■□□□□ 0.5
Limk1P53668 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Limk1P53668 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Limk1P53668 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Limk1P53668 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.18■□□□□ 0.5
Limk1P53668 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Limk1P53668 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Limk1P53668 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.18■□□□□ 0.5
Limk1P53668 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Limk1P53668 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.18■□□□□ 0.5
Limk1P53668 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Limk1P53668 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Limk1P53668 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Limk1P53668 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Limk1P53668 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Limk1P53668 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Limk1P53668 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Limk1P53668 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Limk1P53668 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Limk1P53668 Gm13158-201ENSMUST00000122007 736 ntBASIC18.17■□□□□ 0.5
Limk1P53668 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.17■□□□□ 0.5
Limk1P53668 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Limk1P53668 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Limk1P53668 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.17■□□□□ 0.5
Limk1P53668 Gm10819-201ENSMUST00000099988 561 ntBASIC18.17■□□□□ 0.5
Limk1P53668 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Limk1P53668 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Limk1P53668 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Limk1P53668 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Limk1P53668 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Limk1P53668 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Limk1P53668 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Limk1P53668 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Limk1P53668 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Limk1P53668 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Limk1P53668 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.16■□□□□ 0.5
Limk1P53668 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Limk1P53668 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Limk1P53668 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Limk1P53668 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Limk1P53668 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Limk1P53668 AA386476-201ENSMUST00000098781 1665 ntBASIC18.15■□□□□ 0.5
Limk1P53668 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Limk1P53668 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.15■□□□□ 0.5
Limk1P53668 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.15■□□□□ 0.5
Limk1P53668 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Limk1P53668 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Limk1P53668 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms