Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Xcl1P47993 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Xcl1P47993 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Xcl1P47993 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.22□□□□□ -0.45
Xcl1P47993 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.22□□□□□ -0.45
Xcl1P47993 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.22□□□□□ -0.45
Xcl1P47993 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Xcl1P47993 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Xcl1P47993 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Xcl1P47993 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Xcl1P47993 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Xcl1P47993 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Xcl1P47993 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Xcl1P47993 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Xcl1P47993 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.21□□□□□ -0.45
Xcl1P47993 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Xcl1P47993 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Xcl1P47993 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Xcl1P47993 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Xcl1P47993 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Xcl1P47993 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.21□□□□□ -0.45
Xcl1P47993 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC12.21□□□□□ -0.45
Xcl1P47993 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Xcl1P47993 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Xcl1P47993 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Xcl1P47993 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Xcl1P47993 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Xcl1P47993 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC12.21□□□□□ -0.46
Xcl1P47993 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Xcl1P47993 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Xcl1P47993 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Xcl1P47993 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Xcl1P47993 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.2□□□□□ -0.46
Xcl1P47993 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Xcl1P47993 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Xcl1P47993 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Xcl1P47993 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Xcl1P47993 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Xcl1P47993 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Xcl1P47993 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Xcl1P47993 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.2□□□□□ -0.46
Xcl1P47993 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.2□□□□□ -0.46
Xcl1P47993 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Xcl1P47993 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Xcl1P47993 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Xcl1P47993 Nkain2-201ENSMUST00000092602 558 ntBASIC12.2□□□□□ -0.46
Xcl1P47993 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Xcl1P47993 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Xcl1P47993 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Xcl1P47993 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Xcl1P47993 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Xcl1P47993 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Xcl1P47993 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.2□□□□□ -0.46
Xcl1P47993 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Xcl1P47993 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Xcl1P47993 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Xcl1P47993 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Xcl1P47993 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Xcl1P47993 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Xcl1P47993 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Xcl1P47993 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Xcl1P47993 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Xcl1P47993 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Xcl1P47993 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Xcl1P47993 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Xcl1P47993 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Xcl1P47993 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Xcl1P47993 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Xcl1P47993 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Xcl1P47993 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Xcl1P47993 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Xcl1P47993 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Xcl1P47993 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Xcl1P47993 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Xcl1P47993 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Xcl1P47993 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Xcl1P47993 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Xcl1P47993 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Xcl1P47993 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Xcl1P47993 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Xcl1P47993 Gm8109-201ENSMUST00000194076 746 ntBASIC12.18□□□□□ -0.46
Xcl1P47993 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Xcl1P47993 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Xcl1P47993 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Xcl1P47993 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Xcl1P47993 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Xcl1P47993 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Xcl1P47993 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Xcl1P47993 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Xcl1P47993 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Xcl1P47993 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Xcl1P47993 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Xcl1P47993 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.17□□□□□ -0.46
Xcl1P47993 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Xcl1P47993 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Xcl1P47993 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Xcl1P47993 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Xcl1P47993 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Xcl1P47993 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Xcl1P47993 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms