Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4bP46467 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4bP46467 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vps4bP46467 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.85■□□□□ 0.61
Vps4bP46467 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4bP46467 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4bP46467 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4bP46467 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.85■□□□□ 0.61
Vps4bP46467 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4bP46467 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4bP46467 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4bP46467 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Vps4bP46467 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4bP46467 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.84■□□□□ 0.61
Vps4bP46467 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4bP46467 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4bP46467 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.84■□□□□ 0.61
Vps4bP46467 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.84■□□□□ 0.61
Vps4bP46467 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.84■□□□□ 0.61
Vps4bP46467 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4bP46467 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Vps4bP46467 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Vps4bP46467 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Vps4bP46467 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4bP46467 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4bP46467 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4bP46467 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4bP46467 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.84■□□□□ 0.61
Vps4bP46467 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Vps4bP46467 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4bP46467 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4bP46467 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps4bP46467 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps4bP46467 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps4bP46467 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps4bP46467 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps4bP46467 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps4bP46467 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.61
Vps4bP46467 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.83■□□□□ 0.6
Vps4bP46467 Gm43017-201ENSMUST00000198296 752 ntBASIC18.83■□□□□ 0.6
Vps4bP46467 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.83■□□□□ 0.6
Vps4bP46467 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
Vps4bP46467 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps4bP46467 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vps4bP46467 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vps4bP46467 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps4bP46467 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps4bP46467 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.83■□□□□ 0.6
Vps4bP46467 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Vps4bP46467 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4bP46467 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4bP46467 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4bP46467 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Vps4bP46467 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4bP46467 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4bP46467 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.82■□□□□ 0.6
Vps4bP46467 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4bP46467 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.82■□□□□ 0.6
Vps4bP46467 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.82■□□□□ 0.6
Vps4bP46467 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Vps4bP46467 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4bP46467 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.82■□□□□ 0.6
Vps4bP46467 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Vps4bP46467 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4bP46467 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Vps4bP46467 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4bP46467 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4bP46467 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4bP46467 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4bP46467 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4bP46467 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4bP46467 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4bP46467 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4bP46467 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4bP46467 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4bP46467 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4bP46467 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4bP46467 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4bP46467 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4bP46467 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4bP46467 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4bP46467 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4bP46467 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4bP46467 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4bP46467 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4bP46467 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4bP46467 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4bP46467 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.8■□□□□ 0.6
Vps4bP46467 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4bP46467 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Vps4bP46467 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.8■□□□□ 0.6
Vps4bP46467 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4bP46467 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
Vps4bP46467 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4bP46467 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4bP46467 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4bP46467 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4bP46467 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.8■□□□□ 0.6
Vps4bP46467 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4bP46467 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms