Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-6P43688 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Nkx2-6P43688 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-6P43688 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.58■□□□□ 0.41
Nkx2-6P43688 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-6P43688 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-6P43688 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-6P43688 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-6P43688 Dio3-201ENSMUST00000097228 1449 ntBASIC17.58■□□□□ 0.41
Nkx2-6P43688 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-6P43688 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-6P43688 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Nkx2-6P43688 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-6P43688 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-6P43688 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-6P43688 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.58■□□□□ 0.4
Nkx2-6P43688 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-6P43688 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-6P43688 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-6P43688 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Nkx2-6P43688 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.57■□□□□ 0.4
Nkx2-6P43688 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.57■□□□□ 0.4
Nkx2-6P43688 Gm44549-201ENSMUST00000208351 577 ntBASIC17.57■□□□□ 0.4
Nkx2-6P43688 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.57■□□□□ 0.4
Nkx2-6P43688 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-6P43688 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-6P43688 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-6P43688 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-6P43688 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-6P43688 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.56■□□□□ 0.4
Nkx2-6P43688 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-6P43688 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-6P43688 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Nkx2-6P43688 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-6P43688 Gm12896-201ENSMUST00000118430 226 ntBASIC17.56■□□□□ 0.4
Nkx2-6P43688 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.56■□□□□ 0.4
Nkx2-6P43688 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-6P43688 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Nkx2-6P43688 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-6P43688 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-6P43688 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-6P43688 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.56■□□□□ 0.4
Nkx2-6P43688 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Nkx2-6P43688 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-6P43688 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-6P43688 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nkx2-6P43688 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-6P43688 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-6P43688 Gm5643-201ENSMUST00000117081 966 ntBASIC17.55■□□□□ 0.4
Nkx2-6P43688 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.55■□□□□ 0.4
Nkx2-6P43688 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.55■□□□□ 0.4
Nkx2-6P43688 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-6P43688 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-6P43688 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-6P43688 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-6P43688 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-6P43688 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-6P43688 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.54■□□□□ 0.4
Nkx2-6P43688 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nkx2-6P43688 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-6P43688 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-6P43688 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-6P43688 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Nkx2-6P43688 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-6P43688 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-6P43688 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-6P43688 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-6P43688 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.53■□□□□ 0.4
Nkx2-6P43688 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.53■□□□□ 0.4
Nkx2-6P43688 Gm27275-201ENSMUST00000184318 272 ntBASIC17.53■□□□□ 0.4
Nkx2-6P43688 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-6P43688 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-6P43688 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-6P43688 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-6P43688 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-6P43688 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-6P43688 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-6P43688 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-6P43688 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-6P43688 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.52■□□□□ 0.4
Nkx2-6P43688 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nkx2-6P43688 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nkx2-6P43688 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
Nkx2-6P43688 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms