Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Foxa1P35582 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.21■□□□□ 0.35
Foxa1P35582 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxa1P35582 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxa1P35582 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxa1P35582 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxa1P35582 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Foxa1P35582 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxa1P35582 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Foxa1P35582 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.21■□□□□ 0.35
Foxa1P35582 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Foxa1P35582 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Foxa1P35582 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.21■□□□□ 0.34
Foxa1P35582 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxa1P35582 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxa1P35582 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.2■□□□□ 0.34
Foxa1P35582 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Foxa1P35582 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxa1P35582 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Foxa1P35582 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxa1P35582 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxa1P35582 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Foxa1P35582 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxa1P35582 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Foxa1P35582 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxa1P35582 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Foxa1P35582 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxa1P35582 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Foxa1P35582 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.19■□□□□ 0.34
Foxa1P35582 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxa1P35582 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxa1P35582 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxa1P35582 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxa1P35582 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.19■□□□□ 0.34
Foxa1P35582 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Foxa1P35582 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.19■□□□□ 0.34
Foxa1P35582 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxa1P35582 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.19■□□□□ 0.34
Foxa1P35582 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxa1P35582 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxa1P35582 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxa1P35582 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxa1P35582 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Foxa1P35582 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxa1P35582 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxa1P35582 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Foxa1P35582 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Foxa1P35582 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Foxa1P35582 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.18■□□□□ 0.34
Foxa1P35582 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.18■□□□□ 0.34
Foxa1P35582 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Foxa1P35582 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Foxa1P35582 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.18■□□□□ 0.34
Foxa1P35582 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.18■□□□□ 0.34
Foxa1P35582 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxa1P35582 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxa1P35582 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxa1P35582 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.18■□□□□ 0.34
Foxa1P35582 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.18■□□□□ 0.34
Foxa1P35582 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.18■□□□□ 0.34
Foxa1P35582 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxa1P35582 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.18■□□□□ 0.34
Foxa1P35582 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxa1P35582 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxa1P35582 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Foxa1P35582 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.17■□□□□ 0.34
Foxa1P35582 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.17■□□□□ 0.34
Foxa1P35582 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.17■□□□□ 0.34
Foxa1P35582 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.17■□□□□ 0.34
Foxa1P35582 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.17■□□□□ 0.34
Foxa1P35582 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxa1P35582 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.17■□□□□ 0.34
Foxa1P35582 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxa1P35582 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.17■□□□□ 0.34
Foxa1P35582 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Foxa1P35582 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Foxa1P35582 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxa1P35582 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxa1P35582 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxa1P35582 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.16■□□□□ 0.34
Foxa1P35582 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Foxa1P35582 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Foxa1P35582 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxa1P35582 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxa1P35582 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.16■□□□□ 0.34
Foxa1P35582 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxa1P35582 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.16■□□□□ 0.34
Foxa1P35582 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxa1P35582 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxa1P35582 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.15■□□□□ 0.34
Foxa1P35582 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Foxa1P35582 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxa1P35582 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxa1P35582 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxa1P35582 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Foxa1P35582 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxa1P35582 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.15■□□□□ 0.34
Foxa1P35582 Gm37179-201ENSMUST00000194862 823 ntBASIC17.15■□□□□ 0.34
Foxa1P35582 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.15■□□□□ 0.34
Foxa1P35582 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms