Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a13P31649 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.94■□□□□ 0.62
Slc6a13P31649 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a13P31649 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Slc6a13P31649 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a13P31649 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a13P31649 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a13P31649 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a13P31649 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a13P31649 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a13P31649 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a13P31649 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a13P31649 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a13P31649 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a13P31649 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.93■□□□□ 0.62
Slc6a13P31649 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a13P31649 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a13P31649 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a13P31649 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a13P31649 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a13P31649 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a13P31649 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a13P31649 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a13P31649 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a13P31649 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.92■□□□□ 0.62
Slc6a13P31649 Gm7291-201ENSMUST00000199147 382 ntBASIC18.92■□□□□ 0.62
Slc6a13P31649 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a13P31649 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a13P31649 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a13P31649 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a13P31649 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.92■□□□□ 0.62
Slc6a13P31649 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a13P31649 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Slc6a13P31649 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Slc6a13P31649 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a13P31649 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a13P31649 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a13P31649 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a13P31649 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.91■□□□□ 0.62
Slc6a13P31649 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a13P31649 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a13P31649 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a13P31649 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a13P31649 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a13P31649 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a13P31649 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a13P31649 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a13P31649 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a13P31649 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a13P31649 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Slc6a13P31649 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Slc6a13P31649 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.9■□□□□ 0.62
Slc6a13P31649 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a13P31649 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a13P31649 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a13P31649 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Slc6a13P31649 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a13P31649 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.89■□□□□ 0.61
Slc6a13P31649 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a13P31649 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.89■□□□□ 0.61
Slc6a13P31649 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a13P31649 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a13P31649 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a13P31649 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.89■□□□□ 0.61
Slc6a13P31649 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a13P31649 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a13P31649 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a13P31649 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Slc6a13P31649 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Slc6a13P31649 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a13P31649 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.88■□□□□ 0.61
Slc6a13P31649 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a13P31649 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Slc6a13P31649 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a13P31649 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a13P31649 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a13P31649 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a13P31649 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.87■□□□□ 0.61
Slc6a13P31649 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a13P31649 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a13P31649 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a13P31649 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a13P31649 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Slc6a13P31649 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a13P31649 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a13P31649 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.86■□□□□ 0.61
Slc6a13P31649 Gm37179-201ENSMUST00000194862 823 ntBASIC18.86■□□□□ 0.61
Slc6a13P31649 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Slc6a13P31649 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.86■□□□□ 0.61
Slc6a13P31649 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a13P31649 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Slc6a13P31649 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a13P31649 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.86■□□□□ 0.61
Slc6a13P31649 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a13P31649 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a13P31649 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Slc6a13P31649 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a13P31649 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.85■□□□□ 0.61
Slc6a13P31649 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.85■□□□□ 0.61
Slc6a13P31649 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms