Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa9P09631 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa9P09631 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa9P09631 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa9P09631 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa9P09631 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.71■□□□□ 0.59
Hoxa9P09631 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa9P09631 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa9P09631 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxa9P09631 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa9P09631 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa9P09631 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa9P09631 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa9P09631 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Hoxa9P09631 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Hoxa9P09631 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa9P09631 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa9P09631 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa9P09631 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa9P09631 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Hoxa9P09631 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxa9P09631 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa9P09631 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa9P09631 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa9P09631 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.69■□□□□ 0.58
Hoxa9P09631 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Hoxa9P09631 Gm18666-201ENSMUST00000190039 958 ntBASIC18.69■□□□□ 0.58
Hoxa9P09631 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxa9P09631 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Hoxa9P09631 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.69■□□□□ 0.58
Hoxa9P09631 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.69■□□□□ 0.58
Hoxa9P09631 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa9P09631 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa9P09631 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.68■□□□□ 0.58
Hoxa9P09631 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa9P09631 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hoxa9P09631 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.68■□□□□ 0.58
Hoxa9P09631 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa9P09631 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa9P09631 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hoxa9P09631 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa9P09631 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa9P09631 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa9P09631 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa9P09631 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxa9P09631 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxa9P09631 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxa9P09631 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.67■□□□□ 0.58
Hoxa9P09631 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.67■□□□□ 0.58
Hoxa9P09631 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Hoxa9P09631 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
Hoxa9P09631 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxa9P09631 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa9P09631 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa9P09631 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa9P09631 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa9P09631 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.66■□□□□ 0.58
Hoxa9P09631 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Hoxa9P09631 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa9P09631 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa9P09631 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa9P09631 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa9P09631 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa9P09631 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxa9P09631 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.66■□□□□ 0.58
Hoxa9P09631 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa9P09631 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hoxa9P09631 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa9P09631 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa9P09631 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.65■□□□□ 0.58
Hoxa9P09631 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa9P09631 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Hoxa9P09631 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.65■□□□□ 0.58
Hoxa9P09631 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hoxa9P09631 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa9P09631 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.65■□□□□ 0.58
Hoxa9P09631 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa9P09631 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.65■□□□□ 0.58
Hoxa9P09631 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa9P09631 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa9P09631 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa9P09631 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Hoxa9P09631 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxa9P09631 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.65■□□□□ 0.58
Hoxa9P09631 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.65■□□□□ 0.58
Hoxa9P09631 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hoxa9P09631 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hoxa9P09631 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa9P09631 Gm11249-201ENSMUST00000117071 859 ntBASIC18.64■□□□□ 0.57
Hoxa9P09631 Gm6576-201ENSMUST00000169678 883 ntBASIC18.64■□□□□ 0.57
Hoxa9P09631 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.64■□□□□ 0.57
Hoxa9P09631 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.64■□□□□ 0.57
Hoxa9P09631 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa9P09631 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa9P09631 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa9P09631 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa9P09631 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa9P09631 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxa9P09631 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Hoxa9P09631 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms