Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abcd4O89016 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abcd4O89016 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abcd4O89016 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Abcd4O89016 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Abcd4O89016 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Abcd4O89016 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Abcd4O89016 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Abcd4O89016 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abcd4O89016 Gm6211-202ENSMUST00000167849 925 ntBASIC16.76■□□□□ 0.27
Abcd4O89016 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abcd4O89016 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abcd4O89016 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abcd4O89016 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abcd4O89016 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.76■□□□□ 0.27
Abcd4O89016 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Abcd4O89016 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Abcd4O89016 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcd4O89016 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcd4O89016 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcd4O89016 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcd4O89016 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Abcd4O89016 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcd4O89016 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcd4O89016 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.75■□□□□ 0.27
Abcd4O89016 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Abcd4O89016 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcd4O89016 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Abcd4O89016 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.75■□□□□ 0.27
Abcd4O89016 Gm4968-201ENSMUST00000071458 858 ntBASIC16.75■□□□□ 0.27
Abcd4O89016 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Abcd4O89016 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcd4O89016 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.75■□□□□ 0.27
Abcd4O89016 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Abcd4O89016 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcd4O89016 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Abcd4O89016 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcd4O89016 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcd4O89016 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcd4O89016 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcd4O89016 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcd4O89016 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcd4O89016 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcd4O89016 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcd4O89016 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.74■□□□□ 0.27
Abcd4O89016 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Abcd4O89016 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.74■□□□□ 0.27
Abcd4O89016 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.74■□□□□ 0.27
Abcd4O89016 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Abcd4O89016 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcd4O89016 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Abcd4O89016 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abcd4O89016 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
Abcd4O89016 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Abcd4O89016 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.73■□□□□ 0.27
Abcd4O89016 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.73■□□□□ 0.27
Abcd4O89016 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.73■□□□□ 0.27
Abcd4O89016 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.73■□□□□ 0.27
Abcd4O89016 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.73■□□□□ 0.27
Abcd4O89016 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abcd4O89016 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abcd4O89016 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abcd4O89016 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcd4O89016 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcd4O89016 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcd4O89016 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcd4O89016 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.72■□□□□ 0.27
Abcd4O89016 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcd4O89016 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Abcd4O89016 Gm13148-201ENSMUST00000118892 745 ntBASIC16.72■□□□□ 0.27
Abcd4O89016 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.72■□□□□ 0.27
Abcd4O89016 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcd4O89016 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.72■□□□□ 0.27
Abcd4O89016 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Abcd4O89016 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcd4O89016 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcd4O89016 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcd4O89016 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcd4O89016 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcd4O89016 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcd4O89016 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Abcd4O89016 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcd4O89016 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcd4O89016 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.72■□□□□ 0.27
Abcd4O89016 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.71■□□□□ 0.27
Abcd4O89016 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abcd4O89016 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abcd4O89016 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abcd4O89016 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.71■□□□□ 0.27
Abcd4O89016 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Abcd4O89016 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abcd4O89016 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.71■□□□□ 0.27
Abcd4O89016 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abcd4O89016 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abcd4O89016 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Abcd4O89016 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abcd4O89016 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Abcd4O89016 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Abcd4O89016 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abcd4O89016 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms