Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Hdac3O88895 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.59■□□□□ 0.25
Hdac3O88895 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Hdac3O88895 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.58■□□□□ 0.25
Hdac3O88895 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hdac3O88895 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.58■□□□□ 0.24
Hdac3O88895 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.58■□□□□ 0.24
Hdac3O88895 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hdac3O88895 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hdac3O88895 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Hdac3O88895 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.58■□□□□ 0.24
Hdac3O88895 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hdac3O88895 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hdac3O88895 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
Hdac3O88895 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hdac3O88895 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hdac3O88895 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.57■□□□□ 0.24
Hdac3O88895 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.57■□□□□ 0.24
Hdac3O88895 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Hdac3O88895 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.57■□□□□ 0.24
Hdac3O88895 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.57■□□□□ 0.24
Hdac3O88895 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.57■□□□□ 0.24
Hdac3O88895 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Hdac3O88895 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hdac3O88895 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.57■□□□□ 0.24
Hdac3O88895 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac3O88895 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac3O88895 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac3O88895 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac3O88895 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
Hdac3O88895 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Hdac3O88895 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac3O88895 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac3O88895 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac3O88895 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac3O88895 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac3O88895 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Hdac3O88895 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Hdac3O88895 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac3O88895 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac3O88895 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac3O88895 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac3O88895 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac3O88895 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac3O88895 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Hdac3O88895 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hdac3O88895 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac3O88895 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac3O88895 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac3O88895 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.55■□□□□ 0.24
Hdac3O88895 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Hdac3O88895 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac3O88895 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.55■□□□□ 0.24
Hdac3O88895 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac3O88895 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac3O88895 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Hdac3O88895 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Hdac3O88895 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
Hdac3O88895 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac3O88895 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac3O88895 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac3O88895 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac3O88895 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac3O88895 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac3O88895 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac3O88895 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hdac3O88895 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.54■□□□□ 0.24
Hdac3O88895 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac3O88895 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac3O88895 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac3O88895 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Hdac3O88895 Gm40848-201ENSMUST00000221998 324 ntBASIC16.54■□□□□ 0.24
Hdac3O88895 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac3O88895 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Hdac3O88895 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac3O88895 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.54■□□□□ 0.24
Hdac3O88895 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac3O88895 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hdac3O88895 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms