Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ubr1O70481 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Ubr1O70481 Gm16042-201ENSMUST00000204813 1247 ntBASIC24.44■■□□□ 1.5
Ubr1O70481 AC153881.2-201ENSMUST00000214877 204 ntBASIC24.44■■□□□ 1.5
Ubr1O70481 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ubr1O70481 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ubr1O70481 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC24.44■■□□□ 1.5
Ubr1O70481 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ubr1O70481 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ubr1O70481 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Ubr1O70481 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ubr1O70481 Gm18025-201ENSMUST00000221733 862 ntBASIC24.43■■□□□ 1.5
Ubr1O70481 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
Ubr1O70481 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Ubr1O70481 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ubr1O70481 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ubr1O70481 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ubr1O70481 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ubr1O70481 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ubr1O70481 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ubr1O70481 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC24.42■■□□□ 1.5
Ubr1O70481 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ubr1O70481 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ubr1O70481 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ubr1O70481 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ubr1O70481 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ubr1O70481 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ubr1O70481 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Ubr1O70481 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ubr1O70481 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ubr1O70481 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC24.41■■□□□ 1.5
Ubr1O70481 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ubr1O70481 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ubr1O70481 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ubr1O70481 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ubr1O70481 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
Ubr1O70481 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
Ubr1O70481 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ubr1O70481 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ubr1O70481 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Ubr1O70481 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Ubr1O70481 Gm45560-201ENSMUST00000211492 1472 ntBASIC24.4■■□□□ 1.5
Ubr1O70481 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ubr1O70481 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ubr1O70481 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC24.39■■□□□ 1.5
Ubr1O70481 Gm43799-201ENSMUST00000201845 579 ntBASIC24.39■■□□□ 1.5
Ubr1O70481 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.5
Ubr1O70481 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ubr1O70481 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC24.39■■□□□ 1.49
Ubr1O70481 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC24.39■■□□□ 1.49
Ubr1O70481 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Ubr1O70481 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC24.39■■□□□ 1.49
Ubr1O70481 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ubr1O70481 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ubr1O70481 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ubr1O70481 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Ubr1O70481 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ubr1O70481 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ubr1O70481 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ubr1O70481 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ubr1O70481 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ubr1O70481 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
Ubr1O70481 Gm15375-201ENSMUST00000119510 849 ntBASIC24.37■■□□□ 1.49
Ubr1O70481 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ubr1O70481 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ubr1O70481 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ubr1O70481 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ubr1O70481 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Ubr1O70481 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC24.37■■□□□ 1.49
Ubr1O70481 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ubr1O70481 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ubr1O70481 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ubr1O70481 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ubr1O70481 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ubr1O70481 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ubr1O70481 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ubr1O70481 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ubr1O70481 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ubr1O70481 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ubr1O70481 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Ubr1O70481 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Ubr1O70481 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Ubr1O70481 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
Ubr1O70481 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Ubr1O70481 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Ubr1O70481 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Ubr1O70481 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ubr1O70481 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ubr1O70481 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ubr1O70481 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ubr1O70481 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ubr1O70481 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ubr1O70481 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC24.35■■□□□ 1.49
Ubr1O70481 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ubr1O70481 Gm15853-202ENSMUST00000195518 2041 ntBASIC24.35■■□□□ 1.49
Ubr1O70481 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ubr1O70481 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ubr1O70481 Gm11643-201ENSMUST00000119578 864 ntBASIC24.34■■□□□ 1.49
Ubr1O70481 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ubr1O70481 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms