Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.63■□□□□ 0.41
Rdh5O55240 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh5O55240 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh5O55240 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh5O55240 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh5O55240 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh5O55240 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh5O55240 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rdh5O55240 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rdh5O55240 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rdh5O55240 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rdh5O55240 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rdh5O55240 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rdh5O55240 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rdh5O55240 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Rdh5O55240 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rdh5O55240 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.62■□□□□ 0.41
Rdh5O55240 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.62■□□□□ 0.41
Rdh5O55240 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rdh5O55240 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rdh5O55240 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rdh5O55240 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rdh5O55240 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.61■□□□□ 0.41
Rdh5O55240 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.61■□□□□ 0.41
Rdh5O55240 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rdh5O55240 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.61■□□□□ 0.41
Rdh5O55240 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rdh5O55240 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rdh5O55240 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rdh5O55240 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rdh5O55240 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.61■□□□□ 0.41
Rdh5O55240 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rdh5O55240 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rdh5O55240 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rdh5O55240 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rdh5O55240 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rdh5O55240 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rdh5O55240 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rdh5O55240 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rdh5O55240 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.61■□□□□ 0.41
Rdh5O55240 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rdh5O55240 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rdh5O55240 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rdh5O55240 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rdh5O55240 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rdh5O55240 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rdh5O55240 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.6■□□□□ 0.41
Rdh5O55240 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rdh5O55240 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rdh5O55240 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rdh5O55240 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Rdh5O55240 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rdh5O55240 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rdh5O55240 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rdh5O55240 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rdh5O55240 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rdh5O55240 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rdh5O55240 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Rdh5O55240 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rdh5O55240 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rdh5O55240 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rdh5O55240 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.59■□□□□ 0.41
Rdh5O55240 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rdh5O55240 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rdh5O55240 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rdh5O55240 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rdh5O55240 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rdh5O55240 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rdh5O55240 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rdh5O55240 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rdh5O55240 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rdh5O55240 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rdh5O55240 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rdh5O55240 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rdh5O55240 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.58■□□□□ 0.41
Rdh5O55240 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rdh5O55240 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.58■□□□□ 0.4
Rdh5O55240 Gm29257-201ENSMUST00000186115 639 ntBASIC17.58■□□□□ 0.4
Rdh5O55240 Gm10033-202ENSMUST00000211874 928 ntBASIC17.58■□□□□ 0.4
Rdh5O55240 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rdh5O55240 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rdh5O55240 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rdh5O55240 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rdh5O55240 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.57■□□□□ 0.4
Rdh5O55240 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh5O55240 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh5O55240 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.57■□□□□ 0.4
Rdh5O55240 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh5O55240 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh5O55240 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh5O55240 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh5O55240 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh5O55240 Gm13534-201ENSMUST00000121169 513 ntBASIC17.57■□□□□ 0.4
Rdh5O55240 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.57■□□□□ 0.4
Rdh5O55240 AV356131-201ENSMUST00000206201 750 ntBASIC17.57■□□□□ 0.4
Rdh5O55240 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rdh5O55240 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh5O55240 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.57■□□□□ 0.4
Rdh5O55240 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Rdh5O55240 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms