Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pde6dO55057 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pde6dO55057 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pde6dO55057 Fst-202ENSMUST00000223640 2612 ntBASIC14.7□□□□□ -0.06
Pde6dO55057 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pde6dO55057 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pde6dO55057 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.7□□□□□ -0.06
Pde6dO55057 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pde6dO55057 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pde6dO55057 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pde6dO55057 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.69□□□□□ -0.06
Pde6dO55057 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14.69□□□□□ -0.06
Pde6dO55057 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pde6dO55057 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pde6dO55057 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pde6dO55057 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.69□□□□□ -0.06
Pde6dO55057 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pde6dO55057 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.68□□□□□ -0.06
Pde6dO55057 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6dO55057 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6dO55057 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6dO55057 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6dO55057 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6dO55057 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6dO55057 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6dO55057 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6dO55057 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pde6dO55057 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.68□□□□□ -0.06
Pde6dO55057 Etf1-202ENSMUST00000180351 108 ntBASIC14.68□□□□□ -0.06
Pde6dO55057 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Pde6dO55057 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6dO55057 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6dO55057 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6dO55057 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6dO55057 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pde6dO55057 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pde6dO55057 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.68□□□□□ -0.06
Pde6dO55057 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6dO55057 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.67□□□□□ -0.06
Pde6dO55057 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6dO55057 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6dO55057 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6dO55057 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6dO55057 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6dO55057 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.67□□□□□ -0.06
Pde6dO55057 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6dO55057 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6dO55057 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6dO55057 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pde6dO55057 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6dO55057 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6dO55057 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6dO55057 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6dO55057 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6dO55057 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6dO55057 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6dO55057 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.66□□□□□ -0.06
Pde6dO55057 Gm45444-201ENSMUST00000211394 898 ntBASIC14.66□□□□□ -0.06
Pde6dO55057 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6dO55057 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6dO55057 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6dO55057 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6dO55057 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6dO55057 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6dO55057 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pde6dO55057 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pde6dO55057 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.65□□□□□ -0.06
Pde6dO55057 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pde6dO55057 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pde6dO55057 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pde6dO55057 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.65□□□□□ -0.06
Pde6dO55057 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pde6dO55057 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.65□□□□□ -0.06
Pde6dO55057 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pde6dO55057 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.65□□□□□ -0.06
Pde6dO55057 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.65□□□□□ -0.06
Pde6dO55057 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pde6dO55057 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pde6dO55057 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pde6dO55057 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pde6dO55057 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pde6dO55057 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pde6dO55057 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pde6dO55057 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms