Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Per2O54943 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Per2O54943 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Per2O54943 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Per2O54943 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Per2O54943 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.41■□□□□ 0.7
Per2O54943 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Per2O54943 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Per2O54943 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Per2O54943 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.41■□□□□ 0.7
Per2O54943 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Per2O54943 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per2O54943 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Per2O54943 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per2O54943 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per2O54943 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per2O54943 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per2O54943 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per2O54943 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.4■□□□□ 0.7
Per2O54943 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.4■□□□□ 0.7
Per2O54943 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per2O54943 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Per2O54943 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per2O54943 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per2O54943 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per2O54943 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per2O54943 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per2O54943 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Per2O54943 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Per2O54943 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Per2O54943 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.39■□□□□ 0.69
Per2O54943 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Per2O54943 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Per2O54943 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Per2O54943 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Per2O54943 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.39■□□□□ 0.69
Per2O54943 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Per2O54943 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Per2O54943 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Per2O54943 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Per2O54943 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Per2O54943 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Per2O54943 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Per2O54943 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Per2O54943 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Per2O54943 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.38■□□□□ 0.69
Per2O54943 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.38■□□□□ 0.69
Per2O54943 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Per2O54943 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Per2O54943 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Per2O54943 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Per2O54943 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Per2O54943 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Per2O54943 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Per2O54943 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Per2O54943 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Per2O54943 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Per2O54943 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.37■□□□□ 0.69
Per2O54943 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Per2O54943 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Per2O54943 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Per2O54943 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Per2O54943 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.36■□□□□ 0.69
Per2O54943 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Per2O54943 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Per2O54943 Gm13146-201ENSMUST00000118508 780 ntBASIC19.36■□□□□ 0.69
Per2O54943 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Per2O54943 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Per2O54943 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Per2O54943 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Per2O54943 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.36■□□□□ 0.69
Per2O54943 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Per2O54943 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Per2O54943 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Per2O54943 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Per2O54943 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Per2O54943 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Per2O54943 Gm13234-201ENSMUST00000120010 747 ntBASIC19.35■□□□□ 0.69
Per2O54943 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Per2O54943 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Per2O54943 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Per2O54943 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Per2O54943 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Per2O54943 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.35■□□□□ 0.69
Per2O54943 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.35■□□□□ 0.69
Per2O54943 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Per2O54943 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Per2O54943 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Per2O54943 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.34■□□□□ 0.69
Per2O54943 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Per2O54943 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.34■□□□□ 0.69
Per2O54943 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Per2O54943 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Per2O54943 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Per2O54943 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Per2O54943 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Per2O54943 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Per2O54943 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Per2O54943 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Per2O54943 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms