Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scamp3O35609 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scamp3O35609 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scamp3O35609 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scamp3O35609 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scamp3O35609 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.45■□□□□ 0.54
Scamp3O35609 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scamp3O35609 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Scamp3O35609 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scamp3O35609 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.45■□□□□ 0.54
Scamp3O35609 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scamp3O35609 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scamp3O35609 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scamp3O35609 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.45■□□□□ 0.54
Scamp3O35609 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scamp3O35609 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scamp3O35609 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scamp3O35609 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.44■□□□□ 0.54
Scamp3O35609 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scamp3O35609 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scamp3O35609 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scamp3O35609 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scamp3O35609 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.44■□□□□ 0.54
Scamp3O35609 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Scamp3O35609 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scamp3O35609 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.44■□□□□ 0.54
Scamp3O35609 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scamp3O35609 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scamp3O35609 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scamp3O35609 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scamp3O35609 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scamp3O35609 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scamp3O35609 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.44■□□□□ 0.54
Scamp3O35609 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Scamp3O35609 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scamp3O35609 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.43■□□□□ 0.54
Scamp3O35609 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scamp3O35609 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scamp3O35609 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scamp3O35609 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Scamp3O35609 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scamp3O35609 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scamp3O35609 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scamp3O35609 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.43■□□□□ 0.54
Scamp3O35609 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.43■□□□□ 0.54
Scamp3O35609 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scamp3O35609 Gm27011-201ENSMUST00000182352 972 ntBASIC18.43■□□□□ 0.54
Scamp3O35609 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.43■□□□□ 0.54
Scamp3O35609 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scamp3O35609 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scamp3O35609 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scamp3O35609 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Scamp3O35609 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Scamp3O35609 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scamp3O35609 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Scamp3O35609 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scamp3O35609 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scamp3O35609 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scamp3O35609 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scamp3O35609 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
Scamp3O35609 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.42■□□□□ 0.54
Scamp3O35609 Gm5408-201ENSMUST00000197998 747 ntBASIC18.42■□□□□ 0.54
Scamp3O35609 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Scamp3O35609 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scamp3O35609 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scamp3O35609 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Scamp3O35609 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scamp3O35609 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scamp3O35609 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scamp3O35609 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scamp3O35609 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scamp3O35609 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scamp3O35609 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scamp3O35609 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scamp3O35609 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Scamp3O35609 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Scamp3O35609 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scamp3O35609 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scamp3O35609 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scamp3O35609 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scamp3O35609 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scamp3O35609 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Scamp3O35609 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Scamp3O35609 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scamp3O35609 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scamp3O35609 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Scamp3O35609 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scamp3O35609 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scamp3O35609 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scamp3O35609 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scamp3O35609 Gm6211-202ENSMUST00000167849 925 ntBASIC18.4■□□□□ 0.54
Scamp3O35609 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.4■□□□□ 0.54
Scamp3O35609 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.4■□□□□ 0.54
Scamp3O35609 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scamp3O35609 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scamp3O35609 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scamp3O35609 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scamp3O35609 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Scamp3O35609 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scamp3O35609 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms