Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1O35604 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1O35604 Nespas-201ENSMUST00000143738 1083 ntBASIC18.11■□□□□ 0.49
Npc1O35604 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.11■□□□□ 0.49
Npc1O35604 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.11■□□□□ 0.49
Npc1O35604 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.11■□□□□ 0.49
Npc1O35604 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1O35604 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1O35604 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1O35604 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1O35604 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1O35604 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1O35604 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1O35604 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1O35604 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1O35604 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1O35604 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Npc1O35604 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.11■□□□□ 0.49
Npc1O35604 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1O35604 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Npc1O35604 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1O35604 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1O35604 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1O35604 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1O35604 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Npc1O35604 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1O35604 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Npc1O35604 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1O35604 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1O35604 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1O35604 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Npc1O35604 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Npc1O35604 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Npc1O35604 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1O35604 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1O35604 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Npc1O35604 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Npc1O35604 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1O35604 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1O35604 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1O35604 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Npc1O35604 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1O35604 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Npc1O35604 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Npc1O35604 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Npc1O35604 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Npc1O35604 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Npc1O35604 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Npc1O35604 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Npc1O35604 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Npc1O35604 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.08■□□□□ 0.48
Npc1O35604 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.08■□□□□ 0.48
Npc1O35604 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Npc1O35604 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Npc1O35604 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Npc1O35604 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.07■□□□□ 0.48
Npc1O35604 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.07■□□□□ 0.48
Npc1O35604 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1O35604 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1O35604 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Npc1O35604 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.07■□□□□ 0.48
Npc1O35604 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Npc1O35604 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1O35604 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.07■□□□□ 0.48
Npc1O35604 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Npc1O35604 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.07■□□□□ 0.48
Npc1O35604 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1O35604 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Npc1O35604 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1O35604 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1O35604 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1O35604 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1O35604 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1O35604 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1O35604 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1O35604 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
Npc1O35604 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Npc1O35604 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Npc1O35604 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1O35604 BC021767-201ENSMUST00000126387 1716 ntBASIC18.06■□□□□ 0.48
Npc1O35604 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Npc1O35604 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Npc1O35604 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1O35604 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1O35604 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1O35604 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1O35604 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1O35604 Gm6211-202ENSMUST00000167849 925 ntBASIC18.05■□□□□ 0.48
Npc1O35604 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Npc1O35604 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.05■□□□□ 0.48
Npc1O35604 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1O35604 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.05■□□□□ 0.48
Npc1O35604 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1O35604 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1O35604 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1O35604 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1O35604 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1O35604 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1O35604 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1O35604 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms