Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Abca4O35600 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abca4O35600 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Abca4O35600 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Abca4O35600 Gm6623-201ENSMUST00000173570 544 ntBASIC17.58■□□□□ 0.4
Abca4O35600 Gm10138-203ENSMUST00000206952 366 ntBASIC17.58■□□□□ 0.4
Abca4O35600 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abca4O35600 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abca4O35600 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Abca4O35600 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abca4O35600 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.57■□□□□ 0.4
Abca4O35600 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Abca4O35600 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abca4O35600 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abca4O35600 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.57■□□□□ 0.4
Abca4O35600 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.56■□□□□ 0.4
Abca4O35600 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Abca4O35600 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abca4O35600 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abca4O35600 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Abca4O35600 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abca4O35600 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.56■□□□□ 0.4
Abca4O35600 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.56■□□□□ 0.4
Abca4O35600 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Abca4O35600 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.56■□□□□ 0.4
Abca4O35600 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.56■□□□□ 0.4
Abca4O35600 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Abca4O35600 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abca4O35600 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Abca4O35600 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Abca4O35600 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abca4O35600 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Abca4O35600 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Abca4O35600 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.55■□□□□ 0.4
Abca4O35600 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.55■□□□□ 0.4
Abca4O35600 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.55■□□□□ 0.4
Abca4O35600 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abca4O35600 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.55■□□□□ 0.4
Abca4O35600 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abca4O35600 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Abca4O35600 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.55■□□□□ 0.4
Abca4O35600 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Abca4O35600 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Abca4O35600 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abca4O35600 Gm18958-201ENSMUST00000174258 762 ntBASIC17.55■□□□□ 0.4
Abca4O35600 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abca4O35600 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Abca4O35600 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.55■□□□□ 0.4
Abca4O35600 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Abca4O35600 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Abca4O35600 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Abca4O35600 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.54■□□□□ 0.4
Abca4O35600 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Abca4O35600 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.54■□□□□ 0.4
Abca4O35600 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abca4O35600 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Abca4O35600 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abca4O35600 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Abca4O35600 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Abca4O35600 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.54■□□□□ 0.4
Abca4O35600 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.54■□□□□ 0.4
Abca4O35600 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abca4O35600 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Abca4O35600 Gm27463-201ENSMUST00000183569 57 ntBASIC17.54■□□□□ 0.4
Abca4O35600 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abca4O35600 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abca4O35600 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abca4O35600 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Abca4O35600 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Abca4O35600 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca4O35600 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca4O35600 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca4O35600 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca4O35600 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca4O35600 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Abca4O35600 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Abca4O35600 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Abca4O35600 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.52■□□□□ 0.4
Abca4O35600 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Abca4O35600 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Abca4O35600 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.52■□□□□ 0.4
Abca4O35600 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.52■□□□□ 0.4
Abca4O35600 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.52■□□□□ 0.4
Abca4O35600 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Abca4O35600 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Abca4O35600 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Abca4O35600 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Abca4O35600 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.52■□□□□ 0.39
Abca4O35600 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.52■□□□□ 0.39
Abca4O35600 Gm29518-201ENSMUST00000190858 372 ntBASIC17.52■□□□□ 0.39
Abca4O35600 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Abca4O35600 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abca4O35600 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abca4O35600 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abca4O35600 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abca4O35600 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abca4O35600 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.51■□□□□ 0.39
Abca4O35600 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Abca4O35600 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Abca4O35600 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms