Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stx1aO35526 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stx1aO35526 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Stx1aO35526 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stx1aO35526 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stx1aO35526 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Stx1aO35526 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Stx1aO35526 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.9■□□□□ 0.94
Stx1aO35526 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.9■□□□□ 0.94
Stx1aO35526 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.9■□□□□ 0.94
Stx1aO35526 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Stx1aO35526 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Stx1aO35526 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stx1aO35526 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stx1aO35526 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stx1aO35526 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stx1aO35526 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.89■□□□□ 0.94
Stx1aO35526 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Stx1aO35526 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Stx1aO35526 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Stx1aO35526 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.89■□□□□ 0.93
Stx1aO35526 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Stx1aO35526 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Stx1aO35526 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Stx1aO35526 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Stx1aO35526 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Stx1aO35526 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stx1aO35526 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stx1aO35526 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stx1aO35526 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Stx1aO35526 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stx1aO35526 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stx1aO35526 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stx1aO35526 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Stx1aO35526 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.88■□□□□ 0.93
Stx1aO35526 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stx1aO35526 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stx1aO35526 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Stx1aO35526 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Stx1aO35526 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.88■□□□□ 0.93
Stx1aO35526 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Stx1aO35526 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stx1aO35526 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stx1aO35526 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Stx1aO35526 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stx1aO35526 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Stx1aO35526 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stx1aO35526 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Stx1aO35526 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Stx1aO35526 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Stx1aO35526 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.87■□□□□ 0.93
Stx1aO35526 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.87■□□□□ 0.93
Stx1aO35526 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.87■□□□□ 0.93
Stx1aO35526 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Stx1aO35526 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stx1aO35526 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Stx1aO35526 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stx1aO35526 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Stx1aO35526 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stx1aO35526 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Stx1aO35526 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stx1aO35526 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.86■□□□□ 0.93
Stx1aO35526 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stx1aO35526 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stx1aO35526 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.86■□□□□ 0.93
Stx1aO35526 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stx1aO35526 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stx1aO35526 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stx1aO35526 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Stx1aO35526 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Stx1aO35526 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Stx1aO35526 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stx1aO35526 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Stx1aO35526 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stx1aO35526 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stx1aO35526 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stx1aO35526 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stx1aO35526 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stx1aO35526 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Stx1aO35526 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stx1aO35526 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Stx1aO35526 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stx1aO35526 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.84■□□□□ 0.93
Stx1aO35526 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stx1aO35526 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stx1aO35526 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Stx1aO35526 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stx1aO35526 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stx1aO35526 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Stx1aO35526 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Stx1aO35526 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Stx1aO35526 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Stx1aO35526 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Stx1aO35526 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Stx1aO35526 Gm11421-201ENSMUST00000122124 294 ntBASIC20.83■□□□□ 0.93
Stx1aO35526 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Stx1aO35526 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Stx1aO35526 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Stx1aO35526 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Stx1aO35526 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms