Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfsf11O35235 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfsf11O35235 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Tnfsf11O35235 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Tnfsf11O35235 Gm15820-201ENSMUST00000201566 728 ntBASIC14.52□□□□□ -0.09
Tnfsf11O35235 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfsf11O35235 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfsf11O35235 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfsf11O35235 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfsf11O35235 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfsf11O35235 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.51□□□□□ -0.09
Tnfsf11O35235 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.51□□□□□ -0.09
Tnfsf11O35235 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Tnfsf11O35235 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.51□□□□□ -0.09
Tnfsf11O35235 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfsf11O35235 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.51□□□□□ -0.09
Tnfsf11O35235 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfsf11O35235 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfsf11O35235 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfsf11O35235 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tnfsf11O35235 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfsf11O35235 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Tnfsf11O35235 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfsf11O35235 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Tnfsf11O35235 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfsf11O35235 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Tnfsf11O35235 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfsf11O35235 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfsf11O35235 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfsf11O35235 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Tnfsf11O35235 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.5□□□□□ -0.09
Tnfsf11O35235 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfsf11O35235 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfsf11O35235 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfsf11O35235 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.5□□□□□ -0.09
Tnfsf11O35235 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfsf11O35235 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfsf11O35235 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.5□□□□□ -0.09
Tnfsf11O35235 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Tnfsf11O35235 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfsf11O35235 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfsf11O35235 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfsf11O35235 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfsf11O35235 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Tnfsf11O35235 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfsf11O35235 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfsf11O35235 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfsf11O35235 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.49□□□□□ -0.09
Tnfsf11O35235 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.49□□□□□ -0.09
Tnfsf11O35235 Gm7417-201ENSMUST00000192950 473 ntBASIC14.49□□□□□ -0.09
Tnfsf11O35235 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Tnfsf11O35235 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.48□□□□□ -0.09
Tnfsf11O35235 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfsf11O35235 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf11O35235 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf11O35235 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf11O35235 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf11O35235 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf11O35235 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf11O35235 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.47□□□□□ -0.09
Tnfsf11O35235 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfsf11O35235 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms