Protein–RNA interactions for Protein: O35228

Ebi3, Interleukin-27 subunit beta, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebi3O35228 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebi3O35228 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebi3O35228 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ebi3O35228 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.28□□□□□ -0.12
Ebi3O35228 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebi3O35228 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebi3O35228 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebi3O35228 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebi3O35228 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebi3O35228 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Ebi3O35228 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ebi3O35228 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ebi3O35228 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebi3O35228 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.27□□□□□ -0.12
Ebi3O35228 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebi3O35228 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebi3O35228 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebi3O35228 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebi3O35228 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ebi3O35228 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ebi3O35228 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Ebi3O35228 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.27□□□□□ -0.13
Ebi3O35228 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebi3O35228 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebi3O35228 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Ebi3O35228 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebi3O35228 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebi3O35228 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.26□□□□□ -0.13
Ebi3O35228 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebi3O35228 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ebi3O35228 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebi3O35228 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebi3O35228 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebi3O35228 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebi3O35228 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ebi3O35228 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.26□□□□□ -0.13
Ebi3O35228 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Ebi3O35228 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.26□□□□□ -0.13
Ebi3O35228 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebi3O35228 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ebi3O35228 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebi3O35228 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebi3O35228 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebi3O35228 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebi3O35228 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ebi3O35228 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebi3O35228 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebi3O35228 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebi3O35228 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebi3O35228 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebi3O35228 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebi3O35228 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.25□□□□□ -0.13
Ebi3O35228 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebi3O35228 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ebi3O35228 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Ebi3O35228 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebi3O35228 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebi3O35228 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebi3O35228 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ebi3O35228 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebi3O35228 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebi3O35228 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebi3O35228 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebi3O35228 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebi3O35228 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebi3O35228 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebi3O35228 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebi3O35228 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebi3O35228 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebi3O35228 Gm13534-201ENSMUST00000121169 513 ntBASIC14.24□□□□□ -0.13
Ebi3O35228 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebi3O35228 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebi3O35228 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Ebi3O35228 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebi3O35228 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebi3O35228 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebi3O35228 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebi3O35228 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebi3O35228 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebi3O35228 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebi3O35228 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebi3O35228 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebi3O35228 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebi3O35228 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.23□□□□□ -0.13
Ebi3O35228 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.23□□□□□ -0.13
Ebi3O35228 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Ebi3O35228 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebi3O35228 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Ebi3O35228 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.23□□□□□ -0.13
Ebi3O35228 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebi3O35228 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebi3O35228 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebi3O35228 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebi3O35228 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ebi3O35228 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.23□□□□□ -0.13
Ebi3O35228 Reep4-203ENSMUST00000226563 1444 ntBASIC14.23□□□□□ -0.13
Ebi3O35228 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.23□□□□□ -0.13
Ebi3O35228 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.23□□□□□ -0.13
Ebi3O35228 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebi3O35228 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms