Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2b3O09039 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2b3O09039 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2b3O09039 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2b3O09039 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.51■□□□□ 0.23
Sh2b3O09039 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2b3O09039 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2b3O09039 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Sh2b3O09039 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.51■□□□□ 0.23
Sh2b3O09039 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2b3O09039 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.51■□□□□ 0.23
Sh2b3O09039 Nespas-201ENSMUST00000143738 1083 ntBASIC16.51■□□□□ 0.23
Sh2b3O09039 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.51■□□□□ 0.23
Sh2b3O09039 Gm6420-201ENSMUST00000193885 723 ntBASIC16.51■□□□□ 0.23
Sh2b3O09039 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2b3O09039 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2b3O09039 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sh2b3O09039 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2b3O09039 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2b3O09039 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.51■□□□□ 0.23
Sh2b3O09039 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sh2b3O09039 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2b3O09039 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2b3O09039 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2b3O09039 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.51■□□□□ 0.23
Sh2b3O09039 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.5■□□□□ 0.23
Sh2b3O09039 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2b3O09039 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2b3O09039 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2b3O09039 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sh2b3O09039 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2b3O09039 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2b3O09039 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2b3O09039 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.5■□□□□ 0.23
Sh2b3O09039 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sh2b3O09039 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.5■□□□□ 0.23
Sh2b3O09039 Gm5408-201ENSMUST00000197998 747 ntBASIC16.5■□□□□ 0.23
Sh2b3O09039 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2b3O09039 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Sh2b3O09039 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2b3O09039 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2b3O09039 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh2b3O09039 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sh2b3O09039 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Sh2b3O09039 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sh2b3O09039 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.5■□□□□ 0.23
Sh2b3O09039 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2b3O09039 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sh2b3O09039 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sh2b3O09039 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2b3O09039 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2b3O09039 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2b3O09039 Gm10653-202ENSMUST00000139570 835 ntBASIC16.49■□□□□ 0.23
Sh2b3O09039 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Sh2b3O09039 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sh2b3O09039 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.49■□□□□ 0.23
Sh2b3O09039 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.49■□□□□ 0.23
Sh2b3O09039 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2b3O09039 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2b3O09039 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2b3O09039 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2b3O09039 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh2b3O09039 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.49■□□□□ 0.23
Sh2b3O09039 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2b3O09039 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2b3O09039 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2b3O09039 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.48■□□□□ 0.23
Sh2b3O09039 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2b3O09039 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2b3O09039 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2b3O09039 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.48■□□□□ 0.23
Sh2b3O09039 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2b3O09039 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.48■□□□□ 0.23
Sh2b3O09039 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2b3O09039 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2b3O09039 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2b3O09039 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2b3O09039 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2b3O09039 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2b3O09039 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.48■□□□□ 0.23
Sh2b3O09039 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2b3O09039 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2b3O09039 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2b3O09039 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sh2b3O09039 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2b3O09039 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.47■□□□□ 0.23
Sh2b3O09039 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2b3O09039 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2b3O09039 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.47■□□□□ 0.23
Sh2b3O09039 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.47■□□□□ 0.23
Sh2b3O09039 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2b3O09039 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2b3O09039 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2b3O09039 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Sh2b3O09039 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.47■□□□□ 0.23
Sh2b3O09039 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2b3O09039 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2b3O09039 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2b3O09039 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2b3O09039 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms