Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MsmbO08540 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MsmbO08540 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MsmbO08540 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MsmbO08540 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MsmbO08540 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MsmbO08540 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MsmbO08540 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MsmbO08540 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MsmbO08540 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MsmbO08540 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MsmbO08540 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MsmbO08540 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
MsmbO08540 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MsmbO08540 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.31□□□□□ -0.12
MsmbO08540 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
MsmbO08540 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MsmbO08540 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MsmbO08540 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MsmbO08540 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.31□□□□□ -0.12
MsmbO08540 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MsmbO08540 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.31□□□□□ -0.12
MsmbO08540 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
MsmbO08540 Gm6365-201ENSMUST00000054711 744 ntBASIC14.31□□□□□ -0.12
MsmbO08540 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
MsmbO08540 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MsmbO08540 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MsmbO08540 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MsmbO08540 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MsmbO08540 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
MsmbO08540 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MsmbO08540 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.31□□□□□ -0.12
MsmbO08540 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
MsmbO08540 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MsmbO08540 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MsmbO08540 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
MsmbO08540 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MsmbO08540 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.3□□□□□ -0.12
MsmbO08540 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MsmbO08540 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MsmbO08540 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MsmbO08540 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
MsmbO08540 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.3□□□□□ -0.12
MsmbO08540 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
MsmbO08540 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MsmbO08540 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MsmbO08540 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MsmbO08540 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MsmbO08540 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.29□□□□□ -0.12
MsmbO08540 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
MsmbO08540 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MsmbO08540 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MsmbO08540 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MsmbO08540 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MsmbO08540 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.29□□□□□ -0.12
MsmbO08540 Gm10602-201ENSMUST00000098239 609 ntBASIC14.29□□□□□ -0.12
MsmbO08540 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
MsmbO08540 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
MsmbO08540 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MsmbO08540 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
MsmbO08540 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MsmbO08540 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MsmbO08540 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
MsmbO08540 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MsmbO08540 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MsmbO08540 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
MsmbO08540 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MsmbO08540 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MsmbO08540 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MsmbO08540 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
MsmbO08540 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.28□□□□□ -0.12
MsmbO08540 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
MsmbO08540 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MsmbO08540 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
MsmbO08540 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
MsmbO08540 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MsmbO08540 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MsmbO08540 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MsmbO08540 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MsmbO08540 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MsmbO08540 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MsmbO08540 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MsmbO08540 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MsmbO08540 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MsmbO08540 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MsmbO08540 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MsmbO08540 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MsmbO08540 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
MsmbO08540 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MsmbO08540 Mir5133-201ENSMUST00000174955 77 ntBASIC14.27□□□□□ -0.13
MsmbO08540 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.27□□□□□ -0.13
MsmbO08540 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MsmbO08540 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
MsmbO08540 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MsmbO08540 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MsmbO08540 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MsmbO08540 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MsmbO08540 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MsmbO08540 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MsmbO08540 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms