Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Sgo2bJ3QMK1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sgo2bJ3QMK1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sgo2bJ3QMK1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sgo2bJ3QMK1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sgo2bJ3QMK1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sgo2bJ3QMK1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sgo2bJ3QMK1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.53■□□□□ 0.56
Sgo2bJ3QMK1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sgo2bJ3QMK1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Sgo2bJ3QMK1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sgo2bJ3QMK1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Sgo2bJ3QMK1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sgo2bJ3QMK1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.52■□□□□ 0.56
Sgo2bJ3QMK1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sgo2bJ3QMK1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sgo2bJ3QMK1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sgo2bJ3QMK1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sgo2bJ3QMK1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Sgo2bJ3QMK1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sgo2bJ3QMK1 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.52■□□□□ 0.56
Sgo2bJ3QMK1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sgo2bJ3QMK1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sgo2bJ3QMK1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Sgo2bJ3QMK1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sgo2bJ3QMK1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sgo2bJ3QMK1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sgo2bJ3QMK1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sgo2bJ3QMK1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.51■□□□□ 0.55
Sgo2bJ3QMK1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Sgo2bJ3QMK1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Gm13234-201ENSMUST00000120010 747 ntBASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Gm13534-201ENSMUST00000121169 513 ntBASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgo2bJ3QMK1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms