Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
R3hdm1E9Q9Q2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.5■□□□□ 0.87
R3hdm1E9Q9Q2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
R3hdm1E9Q9Q2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
R3hdm1E9Q9Q2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
R3hdm1E9Q9Q2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3hdm1E9Q9Q2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
R3hdm1E9Q9Q2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3hdm1E9Q9Q2 Gm9987-201ENSMUST00000069768 567 ntBASIC20.49■□□□□ 0.87
R3hdm1E9Q9Q2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3hdm1E9Q9Q2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3hdm1E9Q9Q2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
R3hdm1E9Q9Q2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3hdm1E9Q9Q2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3hdm1E9Q9Q2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.49■□□□□ 0.87
R3hdm1E9Q9Q2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
R3hdm1E9Q9Q2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
R3hdm1E9Q9Q2 Dio3-201ENSMUST00000097228 1449 ntBASIC20.48■□□□□ 0.87
R3hdm1E9Q9Q2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.48■□□□□ 0.87
R3hdm1E9Q9Q2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
R3hdm1E9Q9Q2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3hdm1E9Q9Q2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.48■□□□□ 0.87
R3hdm1E9Q9Q2 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.48■□□□□ 0.87
R3hdm1E9Q9Q2 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.48■□□□□ 0.87
R3hdm1E9Q9Q2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
R3hdm1E9Q9Q2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3hdm1E9Q9Q2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
R3hdm1E9Q9Q2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
R3hdm1E9Q9Q2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3hdm1E9Q9Q2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
R3hdm1E9Q9Q2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
R3hdm1E9Q9Q2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Gm10698-201ENSMUST00000182663 604 ntBASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3hdm1E9Q9Q2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3hdm1E9Q9Q2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3hdm1E9Q9Q2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3hdm1E9Q9Q2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3hdm1E9Q9Q2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.46■□□□□ 0.87
R3hdm1E9Q9Q2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3hdm1E9Q9Q2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3hdm1E9Q9Q2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3hdm1E9Q9Q2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3hdm1E9Q9Q2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3hdm1E9Q9Q2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
R3hdm1E9Q9Q2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
R3hdm1E9Q9Q2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
R3hdm1E9Q9Q2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
R3hdm1E9Q9Q2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
R3hdm1E9Q9Q2 Golph3-205ENSMUST00000228671 2842 ntBASIC20.45■□□□□ 0.86
R3hdm1E9Q9Q2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
R3hdm1E9Q9Q2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
R3hdm1E9Q9Q2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
R3hdm1E9Q9Q2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
R3hdm1E9Q9Q2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
R3hdm1E9Q9Q2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.45■□□□□ 0.86
R3hdm1E9Q9Q2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
R3hdm1E9Q9Q2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
R3hdm1E9Q9Q2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
R3hdm1E9Q9Q2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
R3hdm1E9Q9Q2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
R3hdm1E9Q9Q2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 Gm7860-201ENSMUST00000121190 879 ntBASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 Gm18666-201ENSMUST00000190039 958 ntBASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3hdm1E9Q9Q2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3hdm1E9Q9Q2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
R3hdm1E9Q9Q2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
R3hdm1E9Q9Q2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms