Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdr1E9Q0B4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdr1E9Q0B4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Cdr1E9Q0B4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdr1E9Q0B4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdr1E9Q0B4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdr1E9Q0B4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdr1E9Q0B4 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.39■□□□□ 0.53
Cdr1E9Q0B4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdr1E9Q0B4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdr1E9Q0B4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdr1E9Q0B4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdr1E9Q0B4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdr1E9Q0B4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdr1E9Q0B4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdr1E9Q0B4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdr1E9Q0B4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdr1E9Q0B4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.38■□□□□ 0.53
Cdr1E9Q0B4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdr1E9Q0B4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdr1E9Q0B4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdr1E9Q0B4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.38■□□□□ 0.53
Cdr1E9Q0B4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdr1E9Q0B4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdr1E9Q0B4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdr1E9Q0B4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 Etf1-202ENSMUST00000180351 108 ntBASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cdr1E9Q0B4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdr1E9Q0B4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdr1E9Q0B4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdr1E9Q0B4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
Cdr1E9Q0B4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cdr1E9Q0B4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdr1E9Q0B4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdr1E9Q0B4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdr1E9Q0B4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdr1E9Q0B4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdr1E9Q0B4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdr1E9Q0B4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdr1E9Q0B4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdr1E9Q0B4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdr1E9Q0B4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdr1E9Q0B4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.34■□□□□ 0.53
Cdr1E9Q0B4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdr1E9Q0B4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdr1E9Q0B4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cdr1E9Q0B4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.34■□□□□ 0.53
Cdr1E9Q0B4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdr1E9Q0B4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdr1E9Q0B4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdr1E9Q0B4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdr1E9Q0B4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Cdr1E9Q0B4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdr1E9Q0B4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdr1E9Q0B4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdr1E9Q0B4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdr1E9Q0B4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.33■□□□□ 0.52
Cdr1E9Q0B4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.33■□□□□ 0.52
Cdr1E9Q0B4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.33■□□□□ 0.52
Cdr1E9Q0B4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.33■□□□□ 0.52
Cdr1E9Q0B4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdr1E9Q0B4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.33■□□□□ 0.52
Cdr1E9Q0B4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cdr1E9Q0B4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdr1E9Q0B4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms