Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.84■□□□□ 0.29
Sptbn4E9PX29 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sptbn4E9PX29 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sptbn4E9PX29 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sptbn4E9PX29 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sptbn4E9PX29 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sptbn4E9PX29 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.84■□□□□ 0.29
Sptbn4E9PX29 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Sptbn4E9PX29 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sptbn4E9PX29 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sptbn4E9PX29 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sptbn4E9PX29 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sptbn4E9PX29 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Sptbn4E9PX29 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sptbn4E9PX29 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sptbn4E9PX29 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sptbn4E9PX29 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.83■□□□□ 0.28
Sptbn4E9PX29 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.83■□□□□ 0.28
Sptbn4E9PX29 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sptbn4E9PX29 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sptbn4E9PX29 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Sptbn4E9PX29 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sptbn4E9PX29 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.82■□□□□ 0.28
Sptbn4E9PX29 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sptbn4E9PX29 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.82■□□□□ 0.28
Sptbn4E9PX29 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Sptbn4E9PX29 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.82■□□□□ 0.28
Sptbn4E9PX29 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sptbn4E9PX29 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sptbn4E9PX29 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sptbn4E9PX29 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sptbn4E9PX29 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sptbn4E9PX29 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sptbn4E9PX29 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sptbn4E9PX29 Gm6623-201ENSMUST00000173570 544 ntBASIC16.82■□□□□ 0.28
Sptbn4E9PX29 Gm37935-201ENSMUST00000192012 982 ntBASIC16.82■□□□□ 0.28
Sptbn4E9PX29 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.82■□□□□ 0.28
Sptbn4E9PX29 Gm18115-201ENSMUST00000221209 621 ntBASIC16.82■□□□□ 0.28
Sptbn4E9PX29 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sptbn4E9PX29 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sptbn4E9PX29 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sptbn4E9PX29 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sptbn4E9PX29 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sptbn4E9PX29 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sptbn4E9PX29 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.81■□□□□ 0.28
Sptbn4E9PX29 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sptbn4E9PX29 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sptbn4E9PX29 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sptbn4E9PX29 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sptbn4E9PX29 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Sptbn4E9PX29 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.81■□□□□ 0.28
Sptbn4E9PX29 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sptbn4E9PX29 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sptbn4E9PX29 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sptbn4E9PX29 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sptbn4E9PX29 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sptbn4E9PX29 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.8■□□□□ 0.28
Sptbn4E9PX29 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sptbn4E9PX29 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sptbn4E9PX29 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sptbn4E9PX29 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sptbn4E9PX29 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Sptbn4E9PX29 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sptbn4E9PX29 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sptbn4E9PX29 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sptbn4E9PX29 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sptbn4E9PX29 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sptbn4E9PX29 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.8■□□□□ 0.28
Sptbn4E9PX29 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sptbn4E9PX29 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Sptbn4E9PX29 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Sptbn4E9PX29 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sptbn4E9PX29 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sptbn4E9PX29 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sptbn4E9PX29 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.79■□□□□ 0.28
Sptbn4E9PX29 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.79■□□□□ 0.28
Sptbn4E9PX29 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sptbn4E9PX29 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sptbn4E9PX29 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sptbn4E9PX29 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.79■□□□□ 0.28
Sptbn4E9PX29 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sptbn4E9PX29 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sptbn4E9PX29 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sptbn4E9PX29 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sptbn4E9PX29 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.78■□□□□ 0.28
Sptbn4E9PX29 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.78■□□□□ 0.28
Sptbn4E9PX29 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sptbn4E9PX29 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.78■□□□□ 0.28
Sptbn4E9PX29 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.78■□□□□ 0.28
Sptbn4E9PX29 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sptbn4E9PX29 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sptbn4E9PX29 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sptbn4E9PX29 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sptbn4E9PX29 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sptbn4E9PX29 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sptbn4E9PX29 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sptbn4E9PX29 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sptbn4E9PX29 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Sptbn4E9PX29 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Sptbn4E9PX29 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms