Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh2d4bA6X942 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh2d4bA6X942 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.87■□□□□ 0.77
Sh2d4bA6X942 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sh2d4bA6X942 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Sh2d4bA6X942 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh2d4bA6X942 Rab3c-203ENSMUST00000224180 967 ntBASIC19.87■□□□□ 0.77
Sh2d4bA6X942 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh2d4bA6X942 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Sh2d4bA6X942 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.87■□□□□ 0.77
Sh2d4bA6X942 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sh2d4bA6X942 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh2d4bA6X942 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh2d4bA6X942 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Sh2d4bA6X942 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh2d4bA6X942 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh2d4bA6X942 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh2d4bA6X942 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Sh2d4bA6X942 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh2d4bA6X942 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Sh2d4bA6X942 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sh2d4bA6X942 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.85■□□□□ 0.77
Sh2d4bA6X942 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh2d4bA6X942 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh2d4bA6X942 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh2d4bA6X942 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh2d4bA6X942 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Sh2d4bA6X942 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh2d4bA6X942 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.84■□□□□ 0.77
Sh2d4bA6X942 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.84■□□□□ 0.77
Sh2d4bA6X942 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh2d4bA6X942 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh2d4bA6X942 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh2d4bA6X942 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh2d4bA6X942 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh2d4bA6X942 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh2d4bA6X942 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh2d4bA6X942 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh2d4bA6X942 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh2d4bA6X942 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sh2d4bA6X942 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sh2d4bA6X942 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.83■□□□□ 0.77
Sh2d4bA6X942 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Sh2d4bA6X942 Gm6576-201ENSMUST00000169678 883 ntBASIC19.83■□□□□ 0.77
Sh2d4bA6X942 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Sh2d4bA6X942 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sh2d4bA6X942 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sh2d4bA6X942 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Sh2d4bA6X942 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sh2d4bA6X942 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
Sh2d4bA6X942 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sh2d4bA6X942 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sh2d4bA6X942 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Sh2d4bA6X942 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh2d4bA6X942 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.82■□□□□ 0.76
Sh2d4bA6X942 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Sh2d4bA6X942 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sh2d4bA6X942 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh2d4bA6X942 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sh2d4bA6X942 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
Sh2d4bA6X942 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh2d4bA6X942 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sh2d4bA6X942 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh2d4bA6X942 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh2d4bA6X942 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.81■□□□□ 0.76
Sh2d4bA6X942 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sh2d4bA6X942 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh2d4bA6X942 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Sh2d4bA6X942 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh2d4bA6X942 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.81■□□□□ 0.76
Sh2d4bA6X942 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sh2d4bA6X942 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh2d4bA6X942 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh2d4bA6X942 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh2d4bA6X942 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh2d4bA6X942 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh2d4bA6X942 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Sh2d4bA6X942 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh2d4bA6X942 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh2d4bA6X942 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh2d4bA6X942 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh2d4bA6X942 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh2d4bA6X942 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh2d4bA6X942 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms