Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.66■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Gm5408-201ENSMUST00000197998 747 ntBASIC19.65■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.65■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.65■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Mindy4b-psA0A1W2P7H6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.64■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.64■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.64■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.64■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.63■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.62■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.62■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Gm26524-201ENSMUST00000192339 390 ntBASIC19.62■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 BC021767-201ENSMUST00000126387 1716 ntBASIC19.61■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Gm4968-201ENSMUST00000071458 858 ntBASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.59■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.59■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.59■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Mindy4b-psA0A1W2P7H6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms