Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm38205-201ENSMUST00000192243 258 ntBASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43017-201ENSMUST00000198296 752 ntBASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Rarb-207ENSMUST00000225921 2756 ntBASIC16.29■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.29■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.27■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.27■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms