Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13n-4A0A0G2JG01 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav13n-4A0A0G2JG01 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.05■□□□□ 0
Trav13n-4A0A0G2JG01 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13n-4A0A0G2JG01 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13n-4A0A0G2JG01 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.05■□□□□ 0
Trav13n-4A0A0G2JG01 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13n-4A0A0G2JG01 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13n-4A0A0G2JG01 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-4A0A0G2JG01 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.05■□□□□ -0
Trav13n-4A0A0G2JG01 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.05■□□□□ -0
Trav13n-4A0A0G2JG01 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-4A0A0G2JG01 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.05■□□□□ -0
Trav13n-4A0A0G2JG01 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.05■□□□□ -0
Trav13n-4A0A0G2JG01 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-4A0A0G2JG01 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-4A0A0G2JG01 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-4A0A0G2JG01 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-4A0A0G2JG01 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-4A0A0G2JG01 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-4A0A0G2JG01 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-4A0A0G2JG01 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-4A0A0G2JG01 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav13n-4A0A0G2JG01 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-4A0A0G2JG01 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-4A0A0G2JG01 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Trav13n-4A0A0G2JG01 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Trav13n-4A0A0G2JG01 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.04■□□□□ -0
Trav13n-4A0A0G2JG01 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-4A0A0G2JG01 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-4A0A0G2JG01 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.04■□□□□ -0
Trav13n-4A0A0G2JG01 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-4A0A0G2JG01 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-4A0A0G2JG01 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-4A0A0G2JG01 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-4A0A0G2JG01 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-4A0A0G2JG01 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-4A0A0G2JG01 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13n-4A0A0G2JG01 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav13n-4A0A0G2JG01 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav13n-4A0A0G2JG01 Gm13234-201ENSMUST00000120010 747 ntBASIC15.02■□□□□ -0
Trav13n-4A0A0G2JG01 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.02■□□□□ -0
Trav13n-4A0A0G2JG01 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav13n-4A0A0G2JG01 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.02■□□□□ -0
Trav13n-4A0A0G2JG01 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.02■□□□□ -0
Trav13n-4A0A0G2JG01 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Trav13n-4A0A0G2JG01 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13n-4A0A0G2JG01 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav13n-4A0A0G2JG01 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav13n-4A0A0G2JG01 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13n-4A0A0G2JG01 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13n-4A0A0G2JG01 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13n-4A0A0G2JG01 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Trav13n-4A0A0G2JG01 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Trav13n-4A0A0G2JG01 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13n-4A0A0G2JG01 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13n-4A0A0G2JG01 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13n-4A0A0G2JG01 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13n-4A0A0G2JG01 Reep4-203ENSMUST00000226563 1444 ntBASIC15.01□□□□□ -0.01
Trav13n-4A0A0G2JG01 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav13n-4A0A0G2JG01 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-4A0A0G2JG01 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-4A0A0G2JG01 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-4A0A0G2JG01 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-4A0A0G2JG01 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-4A0A0G2JG01 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav13n-4A0A0G2JG01 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trav13n-4A0A0G2JG01 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-4A0A0G2JG01 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-4A0A0G2JG01 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav13n-4A0A0G2JG01 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav13n-4A0A0G2JG01 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-4A0A0G2JG01 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-4A0A0G2JG01 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15□□□□□ -0.01
Trav13n-4A0A0G2JG01 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms