Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv4-53A0A0G2JFC6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv4-53A0A0G2JFC6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv4-53A0A0G2JFC6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv4-53A0A0G2JFC6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv4-53A0A0G2JFC6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Igkv4-53A0A0G2JFC6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.15□□□□□ -0.3
Igkv4-53A0A0G2JFC6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv4-53A0A0G2JFC6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv4-53A0A0G2JFC6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv4-53A0A0G2JFC6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv4-53A0A0G2JFC6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv4-53A0A0G2JFC6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv4-53A0A0G2JFC6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.14□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-53A0A0G2JFC6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv4-53A0A0G2JFC6 Golph3-205ENSMUST00000228671 2842 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms